FFCP PHASE1:Hg19::chr13:100634111..100634118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7546 | |EntrezGene=7546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12873 | |HGNC=12873 | ||
|TSSclassifier=strong | |||
|UniProt=O95409 | |UniProt=O95409 | ||
|association_with_transcript=85bp_to_ENST00000376335,NM_007129_5end | |association_with_transcript=85bp_to_ENST00000376335,NM_007129_5end | ||
|cluster_id=chr13:100634111..100634118,+ | |||
|coexpression_cluster_id=C1375 | |coexpression_cluster_id=C1375 | ||
|description=CAGE_peak_8_at_ZIC2_5end | |description=CAGE_peak_8_at_ZIC2_5end | ||
|id=chr13:100634111..100634118,+ | |id=chr13:100634111..100634118,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.43e-07!5;CL:0002319!1.65e-07!25 | |ontology_enrichment_celltype=CL:0002322!1.43e-07!5;CL:0002319!1.65e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002575;1.49e-15;2!CL:0002379;1.97e-08;1!CL:0000669;3.23e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,8.66e-16,2;CL:0002379,1.18e-08,1;CL:0000669,2.47e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.77e-23;3 | |||
|ontology_enrichment_disease=DOID:162!6.14e-31!235;DOID:14566!1.31e-29!239;DOID:0050687!2.96e-27!143;DOID:305!7.68e-17!106;DOID:1115!1.54e-09!20;DOID:0050686!2.49e-08!137;DOID:171!5.17e-07!10 | |ontology_enrichment_disease=DOID:162!6.14e-31!235;DOID:14566!1.31e-29!239;DOID:0050687!2.96e-27!143;DOID:305!7.68e-17!106;DOID:1115!1.54e-09!20;DOID:0050686!2.49e-08!137;DOID:171!5.17e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:3371;6.49e-09;1!DOID:4549;6.49e-09;1!DOID:5861;6.49e-09;1!DOID:6496;6.49e-09;1!DOID:3620;1.97e-08;1!DOID:3565;1.97e-08;1!DOID:3347;1.97e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.50e-09,1;DOID:4549,6.50e-09,1;DOID:5861,6.50e-09,1;DOID:6496,6.50e-09,1;DOID:3620,1.18e-08,1;DOID:3565,1.18e-08,1;DOID:3347,1.37e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.28e-15!82;UBERON:0000073!7.73e-15!94;UBERON:0001016!7.73e-15!94;UBERON:0005743!1.12e-14!86;UBERON:0000955!7.61e-13!69;UBERON:0006238!7.61e-13!69;UBERON:0002616!3.97e-11!59;UBERON:0002346!5.09e-11!90;UBERON:0001049!4.20e-10!57;UBERON:0005068!4.20e-10!57;UBERON:0006241!4.20e-10!57;UBERON:0007135!4.20e-10!57;UBERON:0004733!7.83e-10!12;UBERON:0002028!7.83e-10!12;UBERON:0007277!7.83e-10!12;UBERON:0003075!7.10e-09!86;UBERON:0007284!7.10e-09!86;UBERON:0004732!7.46e-09!13;UBERON:0001737!7.97e-09!9;UBERON:0000924!8.36e-09!173;UBERON:0006601!8.36e-09!173;UBERON:0002037!1.27e-08!6;UBERON:0006215!1.27e-08!6;UBERON:0000033!3.72e-08!123;UBERON:0003076!2.67e-07!15;UBERON:0003057!2.67e-07!15;UBERON:0004121!2.91e-07!169;UBERON:0000153!3.04e-07!129;UBERON:0007811!3.04e-07!129;UBERON:0002680!4.02e-07!9;UBERON:0001895!4.02e-07!9;UBERON:0010092!4.02e-07!9 | |ontology_enrichment_uberon=UBERON:0001017!3.28e-15!82;UBERON:0000073!7.73e-15!94;UBERON:0001016!7.73e-15!94;UBERON:0005743!1.12e-14!86;UBERON:0000955!7.61e-13!69;UBERON:0006238!7.61e-13!69;UBERON:0002616!3.97e-11!59;UBERON:0002346!5.09e-11!90;UBERON:0001049!4.20e-10!57;UBERON:0005068!4.20e-10!57;UBERON:0006241!4.20e-10!57;UBERON:0007135!4.20e-10!57;UBERON:0004733!7.83e-10!12;UBERON:0002028!7.83e-10!12;UBERON:0007277!7.83e-10!12;UBERON:0003075!7.10e-09!86;UBERON:0007284!7.10e-09!86;UBERON:0004732!7.46e-09!13;UBERON:0001737!7.97e-09!9;UBERON:0000924!8.36e-09!173;UBERON:0006601!8.36e-09!173;UBERON:0002037!1.27e-08!6;UBERON:0006215!1.27e-08!6;UBERON:0000033!3.72e-08!123;UBERON:0003076!2.67e-07!15;UBERON:0003057!2.67e-07!15;UBERON:0004121!2.91e-07!169;UBERON:0000153!3.04e-07!129;UBERON:0007811!3.04e-07!129;UBERON:0002680!4.02e-07!9;UBERON:0001895!4.02e-07!9;UBERON:0010092!4.02e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.69e-20;6!UBERON:0004733;3.37e-15;12!UBERON:0002028;3.37e-15;12!UBERON:0004732;5.12e-14;13!UBERON:0002680;1.96e-13;9!UBERON:0001895;1.96e-13;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.83e-20,6;UBERON:0006215,2.83e-20,6;UBERON:0004733,2.55e-15,12;UBERON:0002028,2.55e-15,12;UBERON:0007277,2.55e-15,12;UBERON:0004732,3.97e-14,13;UBERON:0002680,1.41e-13,9;UBERON:0001895,1.41e-13,9;UBERON:0010092,1.41e-13,9;UBERON:0003076,3.22e-12,15;UBERON:0003057,3.22e-12,15 | |||
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| ||
|short_description=p8@ZIC2 | |short_description=p8@ZIC2 | ||
}} | }} |
Latest revision as of 07:57, 16 September 2015
Short description: | p8@ZIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ZIC2_5end |
Coexpression cluster: | C1375_cerebellum_Pericytes_extraskeletal_neuroblastoma_teratocarcinoma_neuroectodermal_H9 |
Association with transcript: | 85bp_to_ENST00000376335, NM_007129_5end |
EntrezGene: | ZIC2 |
HGNC: | 12873 |
UniProt: | O95409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 8.66e-16 | 2 |
meningothelial cell | 1.18e-08 | 1 |
pericyte cell | 2.47e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.83e-20 | 6 |
rhombic lip | 2.83e-20 | 6 |
segmental subdivision of hindbrain | 2.55e-15 | 12 |
hindbrain | 2.55e-15 | 12 |
presumptive hindbrain | 2.55e-15 | 12 |
segmental subdivision of nervous system | 3.97e-14 | 13 |
regional part of metencephalon | 1.41e-13 | 9 |
metencephalon | 1.41e-13 | 9 |
future metencephalon | 1.41e-13 | 9 |
posterior neural tube | 3.22e-12 | 15 |
chordal neural plate | 3.22e-12 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.50e-09 | 1 |
extraosseous chondrosarcoma | 6.50e-09 | 1 |
myxoid chondrosarcoma | 6.50e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 6.50e-09 | 1 |
central nervous system cancer | 1.18e-08 | 1 |
meningioma | 1.18e-08 | 1 |
osteosarcoma | 1.37e-08 | 1 |