FFCP PHASE1:Hg19::chr10:112635513..112635515,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:112635513..112635515,+
|short_description=p22@PDCD4
|description=CAGE_peak_22_at_PDCD4_5end
|association_with_transcript=-224bp_to_BX647834_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27250 | |EntrezGene=27250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8763 | |HGNC=8763 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-224bp_to_BX647834_5end | |||
|cluster_id=chr10:112635513..112635515,+ | |||
|description=CAGE_peak_22_at_PDCD4_5end | |||
|id=chr10:112635513..112635515,+ | |||
|ontology_enrichment_celltype=CL:0000738!3.03e-17!140;CL:0000037!1.45e-16!172;CL:0000566!1.45e-16!172;CL:0000988!2.99e-15!182;CL:0002087!8.86e-15!119;CL:0000542!1.11e-14!53;CL:0000051!1.11e-14!53;CL:0000838!7.47e-14!52;CL:0002032!3.86e-13!165;CL:0000837!3.86e-13!165;CL:0002031!9.53e-13!124;CL:0000084!4.51e-08!25;CL:0000827!4.51e-08!25;CL:0000624!7.96e-07!6;CL:0000791!9.35e-07!18;CL:0000789!9.35e-07!18;CL:0002420!9.35e-07!18;CL:0002419!9.35e-07!18;CL:0000790!9.35e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.19e-15;18!CL:0000789;5.19e-15;18!CL:0002419;5.19e-15;18!CL:0000624;6.34e-12;6!CL:0000084;6.66e-11;25!CL:0000771;7.97e-10;2!CL:0000094;2.07e-09;8!CL:0000081;4.43e-07;11!CL:0000542;4.73e-07;53!CL:0000625;5.55e-07;11!CL:0000775;6.50e-07;3!CL:0000784;8.86e-07;3!CL:0000623;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.82e-15,52;CL:0000791,6.12e-15,18;CL:0000789,6.12e-15,18;CL:0002420,6.12e-15,18;CL:0002419,6.12e-15,18;CL:0000790,6.12e-15,18;CL:0000542,7.49e-15,53;CL:0000051,7.49e-15,53;CL:0000738,9.31e-14,136;CL:0000624,7.91e-12,6;CL:0000037,5.56e-11,168;CL:0000084,7.49e-11,25;CL:0000827,7.49e-11,25;CL:0000988,2.23e-10,177;CL:0000771,7.98e-10,2;CL:0000094,1.99e-09,8;CL:0002032,2.01e-09,161;CL:0000837,2.01e-09,161;CL:0002087,1.56e-08,115;CL:0002031,3.75e-08,120;CL:0000081,4.30e-07,11;CL:0000625,5.64e-07,11;CL:0000775,6.14e-07,3;CL:0000623,8.15e-07,3;CL:0000825,8.15e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.19e-15;18!CL:0000051;4.73e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p22@PDCD4 | |||
}} | }} |
Latest revision as of 09:22, 16 September 2015
Short description: | p22@PDCD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_PDCD4_5end |
Coexpression cluster: | NA |
Association with transcript: | -224bp_to_BX647834_5end |
EntrezGene: | PDCD4 |
HGNC: | 8763 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.82e-15 | 52 |
mature alpha-beta T cell | 6.12e-15 | 18 |
alpha-beta T cell | 6.12e-15 | 18 |
immature T cell | 6.12e-15 | 18 |
mature T cell | 6.12e-15 | 18 |
immature alpha-beta T cell | 6.12e-15 | 18 |
lymphocyte | 7.49e-15 | 53 |
common lymphoid progenitor | 7.49e-15 | 53 |
leukocyte | 9.31e-14 | 136 |
CD4-positive, alpha-beta T cell | 7.91e-12 | 6 |
hematopoietic stem cell | 5.56e-11 | 168 |
T cell | 7.49e-11 | 25 |
pro-T cell | 7.49e-11 | 25 |
hematopoietic cell | 2.23e-10 | 177 |
eosinophil | 7.98e-10 | 2 |
granulocyte | 1.99e-09 | 8 |
hematopoietic oligopotent progenitor cell | 2.01e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-09 | 161 |
nongranular leukocyte | 1.56e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 3.75e-08 | 120 |
blood cell | 4.30e-07 | 11 |
CD8-positive, alpha-beta T cell | 5.64e-07 | 11 |
neutrophil | 6.14e-07 | 3 |
natural killer cell | 8.15e-07 | 3 |
pro-NK cell | 8.15e-07 | 3 |