FFCP PHASE1:Hg19::chr3:159482030..159482041,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100505385,29970 | |EntrezGene=100505385,29970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678,38842 | |HGNC=15678,38842 | ||
|TSSclassifier=strong | |||
|UniProt=C9J615 | |UniProt=C9J615 | ||
|association_with_transcript=25bp_to_ENST00000472451_5end | |association_with_transcript=25bp_to_ENST00000472451_5end | ||
|cluster_id=chr3:159482030..159482041,+ | |||
|description=CAGE_peak_19_at_SCHIP1_5end,CAGE_peak_5_at_IQCJ-SCHIP1_5end | |description=CAGE_peak_19_at_SCHIP1_5end,CAGE_peak_5_at_IQCJ-SCHIP1_5end | ||
|id=chr3:159482030..159482041,+ | |id=chr3:159482030..159482041,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.30e-08!254;CL:0002076!6.47e-07!43 | |ontology_enrichment_celltype=CL:0000066!3.30e-08!254;CL:0002076!6.47e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002032;3.54e-08;1!CL:0000557;3.54e-08;1!CL:0000342;9.69e-08;1!CL:0002252;9.69e-08;1!CL:0002565;9.69e-08;1 | |ontology_enrichment_celltype_v019=CL:0002032;3.54e-08;1!CL:0000557;3.54e-08;1!CL:0000342;9.69e-08;1!CL:0002252;9.69e-08;1!CL:0002565;9.69e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002252,6.52e-08,1;CL:0000342,1.75e-07,1;CL:0002565,1.75e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006241;8.88e-10;3!UBERON:0003057;8.88e-10;3 | |ontology_enrichment_development_v019=UBERON:0006241;8.88e-10;3!UBERON:0003057;8.88e-10;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;9.38e-08;14!DOID:0060060;9.69e-08;1!DOID:0060061;9.69e-08;1!DOID:3112;9.69e-08;1!DOID:8691;9.69e-08;1 | |ontology_enrichment_disease_v019=DOID:1749;9.38e-08;14!DOID:0060060;9.69e-08;1!DOID:0060061;9.69e-08;1!DOID:3112;9.69e-08;1!DOID:8691;9.69e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.70e-08,1;DOID:0060061,5.70e-08,1;DOID:8691,5.70e-08,1;DOID:1749,8.30e-08,14;DOID:3112,1.11e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000064!1.68e-07!219 | |ontology_enrichment_uberon=UBERON:0000064!1.68e-07!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;8.88e-10;3!UBERON:0005174;8.88e-10;3!UBERON:0001137;8.88e-10;3!UBERON:0000997;9.69e-08;1!UBERON:0005056;9.69e-08;1!UBERON:0004176;9.69e-08;1!UBERON:0002506;9.69e-08;1!UBERON:0001769;9.69e-08;1!UBERON:0000488;2.50e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0002240;8.88e-10;3!UBERON:0005174;8.88e-10;3!UBERON:0001137;8.88e-10;3!UBERON:0000997;9.69e-08;1!UBERON:0005056;9.69e-08;1!UBERON:0004176;9.69e-08;1!UBERON:0002506;9.69e-08;1!UBERON:0001769;9.69e-08;1!UBERON:0000488;2.50e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,7.47e-10,3;UBERON:0005174,7.47e-10,3;UBERON:0001137,7.47e-10,3;UBERON:0000997,1.04e-07,1;UBERON:0005056,1.04e-07,1;UBERON:0002506,1.75e-07,1;UBERON:0001769,1.75e-07,1;UBERON:0000488,3.90e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,2.53299878168311,0,0.261185628199839,0.245733936501509,0.697801167972428,0.655324116390517,0.263766978228454,0,0,0,0,0.730310090387373,0,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,0.821246550437305,1.12988375635323,0,0,0,0,0.767658796194425,0,0.919421224478927,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0,0,0.144846518960824,0.795285947051099,0.973269740605272,0.661743720148475,1.10864698731282,0.87834785693126,0.261958150995425,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0.275118041940067,0.626984899610432,0.516833518338658,0.35576626268671,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,1.3082821564276,0.496971951695318,0.25326102332916,0.397227542439656,0.860509862246441,0,0,0,0.49333509683432,0,0.269421344139376,0,0,0,0.234321431833797,0,0.570471821544449,0,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0,1.18800285728205,0.247266929278557,0,0,0,0,1.10825646193673,0,0.612975591598039,0.300476117813194,0.113432183160021,1.4351170855109,0,0.635795703478686,0.600182192168805,0.206105058476878,0.772921620136887,0.18611685633159,1.35021065793013,0.389748020644795,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0.508681776931463,0.193260853163297,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0.310983165046111,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,1.02940686179115,0.109750285408626,0,0.402115889646523,0.648119116109707,0.325808305310325,0,0,0.115930404975077,0.469634776943287,0.288732895522148,0,0,0,0,0,0,0,0,0,0.567100388969546,0.358234090811393,0.581267877027924,0,0,0,0.207328115540772,0,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.205654985406647,0.600686115687835,0,0.224262168690721,0,0.36669142910475,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0.791951872933429,0,0,0.399891964728228,0,0,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0,0.315404830067869,0,0,0,0,0,0.553107505625109,0,0,0,0,0,0.106727557803444,0.303127571446259,0,0.604780586659361,0,0.460385919864187,0.280660094433074,0.384417447767103,0.511707249066704,0.965123526861645,0,0.616838775210622,0,0.328508624055237,0,0.348631135379878,0,0.601519410909855,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0.824125183365091,0.577566499444116,0,0,0,0.193341436584244,0.308097234229289,0,0.413509717453592,0,0.290033387828457,0.0852266274161009,0.356128142586949,0.165284915360978,0.384380134730212,2.04180339991335,0.2023155617111,0.464845549297286,0.31481234683064,0,0,0,0.869932992075073,0.37064843820784,0.572499546967965,0,0.316379424718726,0.38126038784765,0,0,0,0.78494864019923,0,0.54907405947211,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0.282810863907425,0,0.551365343546124,0.66343897524122,0,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0.430234056612155,0.589494246078727,0.35667105148125,0,0.211107635297664,0,0.379473173765715,0.699869440489966,0.192444225451024,0.670302275535787,1.08890984861323,0.0941438007767792,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0.213425530045242,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.18714054040822,0.73254089635947,0,0.891547074219827,0.568272293612826,0.95497793895076,0.296964680832639,0,0,0.281338832821026,0.667852230137435,0.494411622680279,0.63337622438398,0.597743964753209,0.276283915531148,0,0.409074730008619,0,0.622079175323615,0.539210106883961,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0,0,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0.173624994933292,0,0.241192877250816,0,0.331737779793674,0,0.438770794307945,0.10893846351899,2.09135616417905,0.153900517007594,0.569710279235006,0.922255617552241,0.448788222048861,0.217294743844016,0.957003479195758,0.366390373607449,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.353830258013357,0.611030144933625,0.296521128680622,0.617819694732514,0.522109747527277,0.808813595768125,0,0.702793337176017,0,0.391329237864179,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0.992975867626496,0,0,0.569219092059585,0.138674673013139,0,1.1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| ||
|short_description=p19@SCHIP1,p5@IQCJ-SCHIP1 | |short_description=p19@SCHIP1,p5@IQCJ-SCHIP1 | ||
}} | }} |
Latest revision as of 09:31, 16 September 2015
Short description: | p19@SCHIP1, p5@IQCJ-SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SCHIP1_5end, CAGE_peak_5_at_IQCJ-SCHIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000472451_5end |
EntrezGene: | 100505385,29970 |
HGNC: | 38842&submit=Submit 15678, 38842 |
UniProt: | C9J615 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of esophagus | 6.52e-08 | 1 |
pigment cell (sensu Vertebrata) | 1.75e-07 | 1 |
iris pigment epithelial cell | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 7.47e-10 | 3 |
dorsal region element | 7.47e-10 | 3 |
dorsum | 7.47e-10 | 3 |
mammalian vulva | 1.04e-07 | 1 |
external female genitalia | 1.04e-07 | 1 |
iris epithelium | 1.75e-07 | 1 |
iris | 1.75e-07 | 1 |
atypical epithelium | 3.90e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.70e-08 | 1 |
cutaneous T cell lymphoma | 5.70e-08 | 1 |
mycosis fungoides | 5.70e-08 | 1 |
squamous cell carcinoma | 8.30e-08 | 14 |
papillary adenocarcinoma | 1.11e-07 | 1 |