FFCP PHASE1:Hg19::chr7:134625860..134625881,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000478075_5end | |association_with_transcript=-10bp_to_ENST00000478075_5end | ||
|cluster_id=chr7:134625860..134625881,+ | |||
|coexpression_cluster_id=C320 | |||
|description=CAGE_peak_38_at_CALD1_5end | |description=CAGE_peak_38_at_CALD1_5end | ||
|id=chr7:134625860..134625881,+ | |id=chr7:134625860..134625881,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.84e-09!180;CL:0000057!2.07e-08!75 | |ontology_enrichment_celltype=CL:0000055!8.84e-09!180;CL:0000057!2.07e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.18e-11;12!CL:0000135;2.83e-09;3!CL:0000388;2.83e-09;3!CL:0002579;3.82e-09;3!CL:0000197;7.96e-09;6!CL:0000098;7.96e-09;6!CL:0002167;7.96e-09;6!CL:0002617;6.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,9.30e-11,12;CL:0002579,1.76e-09,3;CL:0000135,1.97e-09,3;CL:0000388,1.97e-09,3;CL:0000197,7.57e-09,6;CL:0000098,7.57e-09,6;CL:0002167,7.57e-09,6;CL:0000057,1.21e-07,76;CL:0002617,7.98e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;6.75e-07;2 | |||
|ontology_enrichment_disease=DOID:2394!1.48e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!9.88e-08!59;UBERON:0000990!9.88e-08!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.34e-12;6!UBERON:0002358;8.34e-12;6!UBERON:0003684;8.34e-12;6!UBERON:0001178;8.34e-12;6!UBERON:0005904;1.22e-11;4!UBERON:0007846;2.83e-09;3!UBERON:0000043;2.83e-09;3!UBERON:0007845;2.83e-09;3!UBERON:0006947;2.83e-09;3!UBERON:0004054;2.83e-09;3!UBERON:0004457;9.52e-08;9!UBERON:0000042;9.52e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.15e-12,6;UBERON:0002358,4.15e-12,6;UBERON:0003684,4.15e-12,6;UBERON:0001178,4.15e-12,6;UBERON:0005904,5.37e-12,4;UBERON:0006947,1.81e-09,3;UBERON:0004054,1.81e-09,3;UBERON:0007846,1.97e-09,3;UBERON:0000043,1.97e-09,3;UBERON:0007845,1.97e-09,3 | |||
|phase1_expression=1.2717486548939,3.63970890614671,1.55049844505568,0,2.23480547213644,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,2.41077811209591,0,1.46379839637152,0,0,0,0,0.547497700291537,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.579386075843295,0.795285947051099,0,0.472674085820339,1.99556457716308,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,2.43042584364528,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,3.97577561356255,0.506522046658319,0.529636723252875,0,1.06400514659507,1.12135520028461,0,0.49333509683432,0.622422070799533,0.134710672069688,0,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.413303124703062,0,2.22540236350701,0,0,0,0.750711119231785,0,0.877955241761676,2.75839016219118,1.95309476578576,0,0.717558542755448,0.85422955527427,1.48352330811693,0,0.515262646192195,1.54584324027377,0.558350568994769,0.675105328965065,0.0974370051611986,0.504867548488229,0.920498986422993,0.161646056818812,0.710019185033229,0,0.508681776931463,0,0,0,0,0,0.348581828608555,0,0,0,0,5.78916844373597,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.482022059766964,0.441175890929576,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.839910640994298,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.775630294546667,0,1.690605505112,1.59562869950922,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0,0.871533458600294,1.59956785891291,0,0,0,1.4377491329495,1.14861935834114,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.49076596687656,0,0,5.61521326133179,4.99601168632053,4.1002627908823,2.6942525448324,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0.992431231275107,2.14846762603287,2.52594084989766,1.79394808957981,1.53512174720011,2.89537058058494,0,1.23367755042124,0.177561725313127,0.0821271560138091,1.03850885836724,0,0.120859449591622,0.601519410909855,0.276242966807689,0.34444334449382,1.0925470080403,0.786746489756545,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0.214840489736547,0.870100163485371,0.0852266274161009,0.178064071293475,0,0.768760269460425,0.255225424989168,0.2023155617111,0,0.94443704049192,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0.744316738719335,0.316379424718726,0.953150969619124,0,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.707027159768564,0,0,0,0.876901770507525,0,0.655894752046633,0.811641507850816,0.30982349809975,0,0.573645408816206,0.196498082026242,0,0,0,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0,2.59022384726391,0.552567831062295,0.251932747854276,0.306806047506464,0,4.66559381492711,0,0,0,1.97286811273867,0,1.11136990144637,0.969332746095218,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0.923403102045565,0,0,0,0.651884231532048,0.638002319463839,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.530745387020035,1.22206028986725,0,0,0,0,0,0,0,0,0.485560759068186,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0.554698692052555,0.347119476670262,0.0979923974143777,0,1.57254001417827,0,0,0,0.164230914106418,0.872901148395775,0.176512253383001,1.12990370390266,0.411125773940253,0,0,0,0.160317640503067,0.426905989478705,0.19980960958213,0,0,0,0,0.124252535565433,0,0.543616824294456,0.104602846312333,0.305994652908965,0,0,0.273810757783986,0,1.28929632425987,0,0.558564802544508,1.14580212005842,0,0,0.429226048136571,0.89268582976749,0.0671834724867263,2.52209918479682,0,0.236349546921671,0.412079291905832,0.202210631562555,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.472834243795189,0.0524545881349981,0,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,1.30634944043764,0,0,0.681552087141687,0.226624183040251,0.293104467356165,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0.320362237703084,0.157204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0.303298235083296,0,0.705797459094515,0,0,0.149254802886874,0,0,0.568209015825267,0.50313580350515,0,0.686520205190771,0.151230923763239,0,0.147855149989634,0.63718706865481,0.449803112163605,0.310525913752519,0.829412415681711,0.53168342911599,2.08698024724694,0.601030435988874,0.761610424337591,0.406870733204662,0.727394636810238,0.214821114084977,0.928067519756987,4.77715066438339,1.20008329398946,0.686791410365586,1.34699795506368,1.26184898228651,0.192619830407303,0.428883182749851,0.260994291965212,3.62729480819636,0.926089897295336,0.489473409012935,0.71635536432595,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,1.96565909307848,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0,0.327628914576042,0.169732529954025,0.212574920101683,0,0,2.86203915588077,0,0,0.352675943690684,1.531227386766,0,1.41696576325585,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0.381382095467167,0,0.198916222116275,0.676892955143315,0.40341013740704,0,0,0.49131575253029,0,0.0675375846183947,0,0.413373593002368,0,0,0.548257766857182,2.97726707033577,0.175871244359621,0.127762427639595,0,0,1.21393120847326,0,0.620916591138472,0,0.857440047187092,0,0.0657727735628491,0,0,0.627944742804112,0.157115589916002,0,0,0,1.43325506366115,0,0,0,0,2.40513409419076,0,0.51215543128185,0.691259661814092,0,0,0,3.38709640152743,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0,0,0.205325613712494,0,0,0,1.19370465096821,0,0,0,0,0.231522474323834,0.874238242015829,0,4.4126697915703,0,0,0,0,1.86919826156599,0.751871343838829,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,1.5870805215462,1.85997509083376,1.38652688589425,3.46101249699031,0.252332849670158,0.109265571963696,0,0,0,0.0918948995348449,0.50141507858475,0.0757786982182394,0,0,0,0.426467963801962,0.476128862927481,0,0.0620747142958579,0,0.25458863311266,0.202117188958219,1.08858373948481,0,0,0.143444410785353,0,0.162806537221949,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=1.2717486548939,3.63970890614671,1.55049844505568,0,2.23480547213644,0.872338524100369,0,0,0,0,0,0,0,0.123766352960047,0,0.672325146451775,2.41077811209591,0,1.46379839637152,0,0,0,0,0.547497700291537,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.579386075843295,0.795285947051099,0,0.472674085820339,1.99556457716308,0.43917392846563,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0,0,2.43042584364528,0,0.22452937262617,0.225222960966644,0,0,0,0,0,0,3.97577561356255,0.506522046658319,0.529636723252875,0,1.06400514659507,1.12135520028461,0,0.49333509683432,0.622422070799533,0.134710672069688,0,0,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0.245668634623536,0.413303124703062,0,2.22540236350701,0,0,0,0.750711119231785,0,0.877955241761676,2.75839016219118,1.95309476578576,0,0.717558542755448,0.85422955527427,1.48352330811693,0,0.515262646192195,1.54584324027377,0.558350568994769,0.675105328965065,0.0974370051611986,0.504867548488229,0.920498986422993,0.161646056818812,0.710019185033229,0,0.508681776931463,0,0,0,0,0,0.348581828608555,0,0,0,0,5.78916844373597,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.482022059766964,0.441175890929576,0,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,0,0.219500570817251,0,0.100528972411631,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0.839910640994298,0,0.179117045405697,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0.775630294546667,0,1.690605505112,1.59562869950922,0,0,0,0,0.714889968290738,0,0,0.325736184293735,0,0,0,0.871533458600294,1.59956785891291,0,0,0,1.4377491329495,1.14861935834114,0,0.434343920002738,0.410952645100767,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0.49076596687656,0,0,5.61521326133179,4.99601168632053,4.1002627908823,2.6942525448324,0,0,0,0,0,0.60818530127658,0,0,0,0,0,0,0,0,0.992431231275107,2.14846762603287,2.52594084989766,1.79394808957981,1.53512174720011,2.89537058058494,0,1.23367755042124,0.177561725313127,0.0821271560138091,1.03850885836724,0,0.120859449591622,0.601519410909855,0.276242966807689,0.34444334449382,1.0925470080403,0.786746489756545,0,0.231046011313244,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,0.193341436584244,0,0.15350367472613,0,0.214840489736547,0.870100163485371,0.0852266274161009,0.178064071293475,0,0.768760269460425,0.255225424989168,0.2023155617111,0,0.94443704049192,0,0,0.532306030317022,0,0.37064843820784,0.286249773483982,0.744316738719335,0.316379424718726,0.953150969619124,0,0.42793898803392,0,0,0.539617372749944,0.54907405947211,0.471249609382746,0,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.707027159768564,0,0,0,0.876901770507525,0,0.655894752046633,0.811641507850816,0.30982349809975,0,0.573645408816206,0.196498082026242,0,0,0,0.658589785919804,0,0.349934720244983,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0.111308705022906,0,0,2.59022384726391,0.552567831062295,0.251932747854276,0.306806047506464,0,4.66559381492711,0,0,0,1.97286811273867,0,1.11136990144637,0.969332746095218,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0.295547618953547,0.438770794307945,0,0,0.923403102045565,0,0,0,0.651884231532048,0.638002319463839,0.915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.530745387020035,1.22206028986725,0,0,0,0,0,0,0,0,0.485560759068186,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0.313932918407225,0,0,0.554698692052555,0.347119476670262,0.0979923974143777,0,1.57254001417827,0,0,0,0.164230914106418,0.872901148395775,0.176512253383001,1.12990370390266,0.411125773940253,0,0,0,0.160317640503067,0.426905989478705,0.19980960958213,0,0,0,0,0.124252535565433,0,0.543616824294456,0.104602846312333,0.305994652908965,0,0,0.273810757783986,0,1.28929632425987,0,0.558564802544508,1.14580212005842,0,0,0.429226048136571,0.89268582976749,0.0671834724867263,2.52209918479682,0,0.236349546921671,0.412079291905832,0.202210631562555,0,0,0,0,0,0.137539436597234,0.415440338029185,0,0,0,0,0.472834243795189,0.0524545881349981,0,0,0.191915197319445,0,0,0.25426853765475,0.542999601753713,0,1.30634944043764,0,0,0.681552087141687,0.226624183040251,0.293104467356165,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0.320362237703084,0.157204305099666,0.828478110694391,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0.303298235083296,0,0.705797459094515,0,0,0.149254802886874,0,0,0.568209015825267,0.50313580350515,0,0.686520205190771,0.151230923763239,0,0.147855149989634,0.63718706865481,0.449803112163605,0.310525913752519,0.829412415681711,0.53168342911599,2.08698024724694,0.601030435988874,0.761610424337591,0.406870733204662,0.727394636810238,0.214821114084977,0.928067519756987,4.77715066438339,1.20008329398946,0.686791410365586,1.34699795506368,1.26184898228651,0.192619830407303,0.428883182749851,0.260994291965212,3.62729480819636,0.926089897295336,0.489473409012935,0.71635536432595,0,0.219284049578707,0.353378291891762,0,0.168942440653073,0,0.690860683462397,0,0,0,0,0,1.96565909307848,0.245772908753719,0,0,0,0,0.567515953566836,0,0,0,0,0.107824811396682,0,0.327628914576042,0.169732529954025,0.212574920101683,0,0,2.86203915588077,0,0,0.352675943690684,1.531227386766,0,1.41696576325585,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0.381382095467167,0,0.198916222116275,0.676892955143315,0.40341013740704,0,0,0.49131575253029,0,0.0675375846183947,0,0.413373593002368,0,0,0.548257766857182,2.97726707033577,0.175871244359621,0.127762427639595,0,0,1.21393120847326,0,0.620916591138472,0,0.857440047187092,0,0.0657727735628491,0,0,0.627944742804112,0.157115589916002,0,0,0,1.43325506366115,0,0,0,0,2.40513409419076,0,0.51215543128185,0.691259661814092,0,0,0,3.38709640152743,0.22910686854405,0,0,0.223710863595585,0.098150233615243,0,0,0.205325613712494,0,0,0,1.19370465096821,0,0,0,0,0.231522474323834,0.874238242015829,0,4.4126697915703,0,0,0,0,1.86919826156599,0.751871343838829,0,0,0,0,0.0802413666891683,0.730336388246517,0,0,0,0,0,1.5870805215462,1.85997509083376,1.38652688589425,3.46101249699031,0.252332849670158,0.109265571963696,0,0,0,0.0918948995348449,0.50141507858475,0.0757786982182394,0,0,0,0.426467963801962,0.476128862927481,0,0.0620747142958579,0,0.25458863311266,0.202117188958219,1.08858373948481,0,0,0.143444410785353,0,0.162806537221949,0,0,0,2.34640942403454,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p38@CALD1 | |short_description=p38@CALD1 | ||
}} | }} |
Latest revision as of 12:20, 16 September 2015
Short description: | p38@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_CALD1_5end |
Coexpression cluster: | C320_Olfactory_Ewing_smooth_hepatic_Hair_Mesenchymal_Preadipocyte |
Association with transcript: | -10bp_to_ENST00000478075_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 9.30e-11 | 12 |
omentum preadipocyte | 1.76e-09 | 3 |
fibrocyte | 1.97e-09 | 3 |
tendon cell | 1.97e-09 | 3 |
receptor cell | 7.57e-09 | 6 |
sensory epithelial cell | 7.57e-09 | 6 |
olfactory epithelial cell | 7.57e-09 | 6 |
fibroblast | 1.21e-07 | 76 |
adipocyte of breast | 7.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.15e-12 | 6 |
peritoneum | 4.15e-12 | 6 |
abdominal cavity | 4.15e-12 | 6 |
visceral peritoneum | 4.15e-12 | 6 |
duct of male reproductive system | 5.37e-12 | 4 |
male genital duct | 1.81e-09 | 3 |
internal male genitalia | 1.81e-09 | 3 |
dense regular connective tissue | 1.97e-09 | 3 |
tendon | 1.97e-09 | 3 |
regular connective tissue | 1.97e-09 | 3 |