FFCP PHASE1:Hg19::chr14:91710916..91710929,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8111 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4519 | |||
|TSSclassifier=strong | |||
|UniProt=E9PNU7,A1A5B2,Q15743 | |||
|association_with_transcript=-64bp_to_ENST00000529102,ENST00000535815,NM_001177676,uc001xzg.2_5end | |||
|cluster_id=chr14:91710916..91710929,- | |||
|coexpression_cluster_id=C239 | |||
|description=CAGE_peak_4_at_GPR68_5end | |||
|id=chr14:91710916..91710929,- | |||
|ontology_enrichment_celltype=CL:0000084!3.26e-14!25;CL:0000827!3.26e-14!25;CL:0000791!1.45e-12!18;CL:0000789!1.45e-12!18;CL:0002420!1.45e-12!18;CL:0002419!1.45e-12!18;CL:0000790!1.45e-12!18;CL:0000625!8.44e-12!11;CL:0000838!1.24e-07!52;CL:0000542!2.28e-07!53;CL:0000051!2.28e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.84e-26;25!CL:0000791;1.87e-19;18!CL:0000789;1.87e-19;18!CL:0002419;1.87e-19;18!CL:0000625;2.54e-18;11!CL:0000346;2.64e-08;3!CL:1000428;2.64e-08;3!CL:0002127;1.59e-07;1!CL:0000911;1.59e-07;1!CL:0000814;1.59e-07;1!CL:0000228;7.72e-07;1!CL:0002372;7.72e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.85e-26,25;CL:0000827,5.85e-26,25;CL:0000791,1.79e-19,18;CL:0000789,1.79e-19,18;CL:0002420,1.79e-19,18;CL:0002419,1.79e-19,18;CL:0000790,1.79e-19,18;CL:0000625,2.05e-18,11;CL:0000838,2.11e-11,52;CL:0000542,3.79e-11,53;CL:0000051,3.79e-11,53;CL:0000346,2.28e-08,3;CL:1000428,2.28e-08,3;CL:0002127,1.75e-07,1;CL:0000914,1.75e-07,1;CL:0000911,1.75e-07,1;CL:0000814,1.75e-07,1;CL:0002042,1.75e-07,1;CL:0002039,1.75e-07,1;CL:0002040,1.75e-07,1;CL:0002041,1.75e-07,1;CL:0000228,6.88e-07,1;CL:0002372,6.88e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;1.87e-19;18!UBERON:0000358;3.94e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;3.94e-07;1!DOID:0060061;3.94e-07;1!DOID:8691;3.94e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.40e-07,1;DOID:0060061,3.40e-07,1;DOID:8691,3.40e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!7.33e-08!15;UBERON:0000179!7.33e-08!15;UBERON:0000463!7.33e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.21e-13;15!UBERON:0000179;2.21e-13;15!UBERON:0000463;2.21e-13;15!UBERON:0000412;2.64e-08;3!UBERON:0001992;2.64e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.47e-13,15;UBERON:0000179,2.47e-13,15;UBERON:0000463,2.47e-13,15;UBERON:0000412,2.28e-08,3;UBERON:0001992,2.28e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0.672325146451775,0.602694528023977,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0.393364276848904,1.91914699048606,0.154816123316076,0,0,0,0,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0.575384784644301,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0.398927315243264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,2.84217042164153,0,0,0,5.45911238737351,2.3568472597987,0.886135578334485,1.08321545506006,3.71464827204458,5.33243324995501,4.76869923350661,4.69795030235942,4.34704628602579,0,0,0,4.53237370790265,0.383220493601921,0.34362744548263,0.759059076058509,2.86708872891687,0,0.950452044448374,3.01150238155546,2.43174561193395,1.24930726552346,3.31488152861624,1.64225599384209,0.80642697289893,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.448346041655403,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0.300476117813194,0,0,0,0,0.600182192168805,0.103052529238439,0,0.18611685633159,0.506328996723799,0,0,0.0920498986422993,0,0,0,0,0,0.818238361772504,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0.671928512795438,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,1.42636905040718,0,0.205476322550383,0,5.26800176769578,0.591092280605782,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0.413536052245775,0.215714200818617,0.74709290462411,0,0,0,0,0,0.280660094433074,0,0,0,0,0.462629081407967,0.177561725313127,0.164254312027618,0.519254429183621,0.232420756919918,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.876901770507525,0,0,0.608731130888112,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,2.53723804616085,0.764637207142375,1.13929437434833,2.38231775457789,2.46817363851717,0,4.32025149790492,2.37937552888281,0,0,0,0,0,0,0.318852545457645,0,0.383010740264733,1.90506224451495,0,0,0.456469358066384,0.156679895773023,0,0,0,0.201799707191048,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,5.43852784948307,0,0.398495976502139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384751292518985,0.113942055847001,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.274083849293502,0.397429223405979,0,0,0.240476460754601,0.213452994739353,0,0,0,0,0,0,0,0,0.209205692624666,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.899895566206002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0.15543720058278,0.443565449968902,0.318593534327405,0.449803112163605,0,0.829412415681711,0,0,0.150257608997218,0,0,1.09109195521536,0.214821114084977,0.464033759878494,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,2.59983614611409,0.213383459388282,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,1.0085253435176,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0.469919589899268,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0,0,0,0.875576689189638,0.215166616178029,0,0.0814032686109745,0,0,0,2.34640942403454,0.488965776731466,0,0,0.603821380773079,0 | |||
|short_description=p4@GPR68 | |||
}} |
Latest revision as of 13:17, 16 September 2015
Short description: | p4@GPR68 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPR68_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | -64bp_to_ENST00000529102, ENST00000535815, NM_001177676, uc001xzg.2_5end |
EntrezGene: | GPR68 |
HGNC: | 4519 |
UniProt: | E9PNU7A1A5B2Q15743 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.85e-26 | 25 |
pro-T cell | 5.85e-26 | 25 |
mature alpha-beta T cell | 1.79e-19 | 18 |
alpha-beta T cell | 1.79e-19 | 18 |
immature T cell | 1.79e-19 | 18 |
mature T cell | 1.79e-19 | 18 |
immature alpha-beta T cell | 1.79e-19 | 18 |
CD8-positive, alpha-beta T cell | 2.05e-18 | 11 |
lymphoid lineage restricted progenitor cell | 2.11e-11 | 52 |
lymphocyte | 3.79e-11 | 53 |
common lymphoid progenitor | 3.79e-11 | 53 |
hair follicle dermal papilla cell | 2.28e-08 | 3 |
stem cell of epidermis | 2.28e-08 | 3 |
innate effector T cell | 1.75e-07 | 1 |
immature NK T cell | 1.75e-07 | 1 |
effector T cell | 1.75e-07 | 1 |
mature NK T cell | 1.75e-07 | 1 |
immature NK T cell stage IV | 1.75e-07 | 1 |
immature NK T cell stage I | 1.75e-07 | 1 |
immature NK T cell stage II | 1.75e-07 | 1 |
immature NK T cell stage III | 1.75e-07 | 1 |
multinucleate cell | 6.88e-07 | 1 |
myotube | 6.88e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 2.47e-13 | 15 |
haemolymphatic fluid | 2.47e-13 | 15 |
organism substance | 2.47e-13 | 15 |
dermal papilla | 2.28e-08 | 3 |
papillary layer of dermis | 2.28e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.40e-07 | 1 |
cutaneous T cell lymphoma | 3.40e-07 | 1 |
mycosis fungoides | 3.40e-07 | 1 |