FFCP PHASE1:Hg19::chr9:139743825..139743834,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:139743825..139743834,+ to FFCP PHASE1:Hg19::chr9:139743825..139743834,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=29085 | |EntrezGene=29085 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30033 | |HGNC=30033 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000462205_5end | |||
|cluster_id=chr9:139743825..139743834,+ | |||
|description=CAGE_peak_7_at_PHPT1_5end | |||
|id=chr9:139743825..139743834,+ | |||
|ontology_enrichment_celltype=CL:0002321!4.02e-24!248;CL:0000220!1.50e-23!246;CL:0000548!1.76e-20!679;CL:0000004!1.76e-20!679;CL:0000255!1.76e-20!679;CL:0000012!6.88e-20!682;CL:0000183!7.77e-19!59;CL:0000222!1.18e-18!119;CL:0000187!1.55e-16!54;CL:0000680!2.25e-16!57;CL:0000056!2.25e-16!57;CL:0000355!2.25e-16!57;CL:0000393!6.53e-16!60;CL:0000211!6.53e-16!60;CL:0000055!3.62e-15!180;CL:0000192!6.14e-15!42;CL:0000514!6.14e-15!42;CL:0002371!2.51e-14!591;CL:0000144!5.32e-14!625;CL:0000359!6.27e-11!32;CL:0000066!4.16e-10!254;CL:0000003!1.02e-09!722 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.23e-12;43!CL:0000359;1.38e-11;32!CL:0000187;9.24e-10;55!CL:0000393;7.78e-08;61!CL:0000211;7.78e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.72e-19,250;CL:0000222,3.19e-19,121;CL:0000192,4.90e-18,43;CL:0000514,4.90e-18,43;CL:0000187,1.63e-17,55;CL:0000680,1.70e-16,58;CL:0000056,1.70e-16,58;CL:0000355,1.70e-16,58;CL:0000393,3.54e-15,61;CL:0000211,3.54e-15,61;CL:0000359,8.44e-13,32 | |||
|ontology_enrichment_development_v019=CL:0000514;2.23e-12;43!CL:0000355;8.53e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.38e-20!83;UBERON:0002329!7.38e-20!83;UBERON:0003077!7.38e-20!83;UBERON:0003059!7.38e-20!83;UBERON:0007282!7.38e-20!83;UBERON:0009618!7.38e-20!83;UBERON:0007285!7.38e-20!83;UBERON:0000486!2.58e-19!82;UBERON:0004290!4.56e-18!70;UBERON:0003104!3.53e-16!238;UBERON:0009142!3.53e-16!238;UBERON:0001134!8.24e-16!61;UBERON:0002036!8.24e-16!61;UBERON:0003082!8.24e-16!61;UBERON:0002385!9.96e-15!63;UBERON:0001015!9.96e-15!63;UBERON:0000383!9.96e-15!63;UBERON:0005256!5.14e-14!143;UBERON:0002100!1.98e-13!216;UBERON:0000490!1.40e-11!138;UBERON:0002049!3.18e-11!79;UBERON:0007798!3.18e-11!79;UBERON:0000481!7.03e-11!347;UBERON:0000055!2.44e-10!69;UBERON:0004872!6.45e-09!84;UBERON:0001981!9.33e-09!60;UBERON:0007500!9.33e-09!60;UBERON:0004537!9.33e-09!60;UBERON:0006965!9.33e-09!60;UBERON:0001637!3.50e-08!42;UBERON:0003509!3.50e-08!42;UBERON:0004572!3.50e-08!42;UBERON:0000483!6.69e-08!309;UBERON:0000119!7.98e-08!312;UBERON:0003914!1.58e-07!118;UBERON:0004535!5.67e-07!110;UBERON:0005085!6.37e-07!29;UBERON:0001009!9.16e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.56e-08;33!UBERON:0004571;5.56e-08;33!UBERON:0000072;2.26e-07;37!UBERON:0001637;4.63e-07;42!UBERON:0003509;4.63e-07;42!UBERON:0004572;4.63e-07;42!UBERON:0003914;7.50e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.31e-22,78;UBERON:0000486,3.69e-19,83;UBERON:0007524,1.24e-18,73;UBERON:0002329,1.38e-18,71;UBERON:0003059,1.38e-18,71;UBERON:0007282,1.38e-18,71;UBERON:0004290,1.38e-18,71;UBERON:0009618,1.38e-18,71;UBERON:0003077,4.69e-18,72;UBERON:0007285,4.69e-18,72;UBERON:0001134,3.69e-16,62;UBERON:0002036,3.69e-16,62;UBERON:0003082,3.69e-16,62;UBERON:0002385,3.96e-15,64;UBERON:0001015,3.96e-15,64;UBERON:0000383,3.96e-15,64;UBERON:0000490,9.51e-14,148;UBERON:0002049,1.13e-13,78;UBERON:0007798,1.13e-13,78;UBERON:0005256,3.53e-13,122;UBERON:0000055,4.73e-13,68;UBERON:0007500,1.95e-11,59;UBERON:0001981,1.95e-11,59;UBERON:0004537,1.95e-11,59;UBERON:0006965,1.95e-11,59;UBERON:0002100,4.60e-11,199;UBERON:0001637,1.16e-10,42;UBERON:0003509,1.16e-10,42;UBERON:0004572,1.16e-10,42;UBERON:0003104,1.36e-10,160;UBERON:0009142,1.36e-10,160;UBERON:0000483,2.03e-10,306;UBERON:0004872,2.99e-10,83;UBERON:0000119,5.55e-10,309;UBERON:0004535,5.14e-09,109;UBERON:0004573,7.68e-09,33;UBERON:0004571,7.68e-09,33;UBERON:0001009,8.15e-09,112;UBERON:0003914,2.59e-07,117;UBERON:0005085,2.68e-07,31 | |||
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| ||
|short_description=p7@PHPT1 | |||
}} | }} |
Latest revision as of 13:48, 16 September 2015
Short description: | p7@PHPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PHPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | -42bp_to_ENST00000462205_5end |
EntrezGene: | PHPT1 |
HGNC: | 30033 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.72e-19 | 250 |
mesodermal cell | 3.19e-19 | 121 |
smooth muscle cell | 4.90e-18 | 43 |
smooth muscle myoblast | 4.90e-18 | 43 |
muscle cell | 1.63e-17 | 55 |
muscle precursor cell | 1.70e-16 | 58 |
myoblast | 1.70e-16 | 58 |
multi-potent skeletal muscle stem cell | 1.70e-16 | 58 |
electrically responsive cell | 3.54e-15 | 61 |
electrically active cell | 3.54e-15 | 61 |
vascular associated smooth muscle cell | 8.44e-13 | 32 |