FFCP PHASE1:Hg19::chr11:126275925..126275951,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6484 | |EntrezGene=6484 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10864 | |HGNC=10864 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_uc009zce.2_5end | |association_with_transcript=-30bp_to_uc009zce.2_5end | ||
|cluster_id=chr11:126275925..126275951,+ | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_6_at_ST3GAL4_5end | |description=CAGE_peak_6_at_ST3GAL4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!3.74e-10!7;CL:0000586!3.74e-10!7;CL:0000066!3.49e-08!254 | |ontology_enrichment_celltype=CL:0000039!3.74e-10!7;CL:0000586!3.74e-10!7;CL:0000066!3.49e-08!254 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.93e-11;1!UBERON:0009143;5.30e-11;1 | |ontology_enrichment_development_v019=UBERON:0003124;2.93e-11;1!UBERON:0009143;5.30e-11;1 | ||
|ontology_enrichment_disease=DOID:305!2.15e-20!106;DOID:0050687!2.16e-16!143;DOID:162!1.41e-10!235;DOID:14566!3.81e-10!239;DOID:5093!9.48e-07!4;DOID:1612!9.48e-07!4 | |ontology_enrichment_disease=DOID:305!2.15e-20!106;DOID:0050687!2.16e-16!143;DOID:162!1.41e-10!235;DOID:14566!3.81e-10!239;DOID:5093!9.48e-07!4;DOID:1612!9.48e-07!4 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.25e-14!169;UBERON:0000925!1.25e-14!169;UBERON:0006595!1.25e-14!169;UBERON:0004921!1.97e-14!129;UBERON:0004185!1.97e-14!129;UBERON:0001007!1.76e-13!155;UBERON:0001555!1.76e-13!155;UBERON:0007026!1.76e-13!155;UBERON:0000077!2.18e-12!130;UBERON:0000344!5.02e-10!12;UBERON:0000072!2.24e-08!46;UBERON:0001041!6.51e-08!98;UBERON:0008947!1.13e-07!38;UBERON:0003258!1.13e-07!38;UBERON:0001004!1.20e-07!72;UBERON:0001737!3.22e-07!9;UBERON:0003127!4.52e-07!2;UBERON:0000065!7.20e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!1.25e-14!169;UBERON:0000925!1.25e-14!169;UBERON:0006595!1.25e-14!169;UBERON:0004921!1.97e-14!129;UBERON:0004185!1.97e-14!129;UBERON:0001007!1.76e-13!155;UBERON:0001555!1.76e-13!155;UBERON:0007026!1.76e-13!155;UBERON:0000077!2.18e-12!130;UBERON:0000344!5.02e-10!12;UBERON:0000072!2.24e-08!46;UBERON:0001041!6.51e-08!98;UBERON:0008947!1.13e-07!38;UBERON:0003258!1.13e-07!38;UBERON:0001004!1.20e-07!72;UBERON:0001737!3.22e-07!9;UBERON:0003127!4.52e-07!2;UBERON:0000065!7.20e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.15e-10;1!UBERON:0001961;1.15e-10;1!UBERON:0001744;1.15e-10;1!UBERON:0001042;1.15e-10;1!UBERON:0001735;1.15e-10;1!UBERON:0004921;1.72e-08;33!UBERON:0000059;2.54e-08;11!UBERON:0005409;7.14e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002372;1.15e-10;1!UBERON:0001961;1.15e-10;1!UBERON:0001744;1.15e-10;1!UBERON:0001042;1.15e-10;1!UBERON:0001735;1.15e-10;1!UBERON:0004921;1.72e-08;33!UBERON:0000059;2.54e-08;11!UBERON:0005409;7.14e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,9.97e-11,1;UBERON:0001961,9.97e-11,1;UBERON:0001744,9.97e-11,1;UBERON:0001735,9.97e-11,1;UBERON:0000059,2.33e-08,11 | |||
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| ||
|short_description=p6@ST3GAL4 | |short_description=p6@ST3GAL4 | ||
}} | }} |
Latest revision as of 14:23, 16 September 2015
Short description: | p6@ST3GAL4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ST3GAL4_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | -30bp_to_uc009zce.2_5end |
EntrezGene: | ST3GAL4 |
HGNC: | 10864 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tonsil | 9.97e-11 | 1 |
mucosa-associated lymphoid tissue | 9.97e-11 | 1 |
lymphoid tissue | 9.97e-11 | 1 |
tonsillar ring | 9.97e-11 | 1 |
large intestine | 2.33e-08 | 11 |