FFCP PHASE1:Hg19::chr8:134067569..134067571,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100302522 | |EntrezGene=100302522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=37127 | |HGNC=37127 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=365bp_to_AK023948_5end | |association_with_transcript=365bp_to_AK023948_5end | ||
|cluster_id=chr8:134067569..134067571,+ | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_9_at_PTCSC_5end | |description=CAGE_peak_9_at_PTCSC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000084!2.43e-07!25;CL:0000827!2.43e-07!25 | |ontology_enrichment_celltype=CL:0000084!2.43e-07!25;CL:0000827!2.43e-07!25 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.48e-40;5 | |ontology_enrichment_development_v019=UBERON:0007123;1.48e-40;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!4.66e-21!2;UBERON:0002046!2.53e-09!5;UBERON:0004117!2.53e-09!5;UBERON:0007689!2.53e-09!5;UBERON:0007123!2.53e-09!5;UBERON:0003091!2.53e-09!5 | |ontology_enrichment_uberon=UBERON:0000341!4.66e-21!2;UBERON:0002046!2.53e-09!5;UBERON:0004117!2.53e-09!5;UBERON:0007689!2.53e-09!5;UBERON:0007123!2.53e-09!5;UBERON:0003091!2.53e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.48e-40;5!UBERON:0002368;2.32e-07;33 | |ontology_enrichment_uberon_v019=UBERON:0002046;1.48e-40;5!UBERON:0002368;2.32e-07;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.48e-40,5;UBERON:0004117,1.48e-40,5;UBERON:0007689,1.48e-40,5;UBERON:0007123,1.48e-40,5;UBERON:0003091,1.48e-40,5;UBERON:0009722,2.25e-19,11;UBERON:0007690,2.25e-19,11;UBERON:0008814,1.85e-12,18;UBERON:0002368,4.03e-07,35 | |||
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|short_description=p9@PTCSC | |short_description=p9@PTCSC | ||
}} | }} |
Latest revision as of 15:01, 16 September 2015
Short description: | p9@PTCSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PTCSC_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 365bp_to_AK023948_5end |
EntrezGene: | PTCSC |
HGNC: | 37127 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.48e-40 | 5 |
pharyngeal pouch | 1.48e-40 | 5 |
thyroid diverticulum | 1.48e-40 | 5 |
pharyngeal pouch 2 | 1.48e-40 | 5 |
thyroid primordium | 1.48e-40 | 5 |
entire pharyngeal arch endoderm | 2.25e-19 | 11 |
early pharyngeal endoderm | 2.25e-19 | 11 |
pharyngeal arch system | 1.85e-12 | 18 |
endocrine gland | 4.03e-07 | 35 |