FFCP PHASE1:Hg19::chr13:113698799..113698819,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23263 | |EntrezGene=23263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14576 | |HGNC=14576 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000469558_5end | |association_with_transcript=23bp_to_ENST00000469558_5end | ||
|cluster_id=chr13:113698799..113698819,+ | |||
|coexpression_cluster_id=C58 | |coexpression_cluster_id=C58 | ||
|description=CAGE_peak_15_at_MCF2L_5end | |description=CAGE_peak_15_at_MCF2L_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000148!5.47e-19!10;CL:0000541!5.47e-19!10;CL:0000147!3.09e-13!14;CL:0002567!8.48e-13!3;CL:0000710!6.34e-09!20 | |ontology_enrichment_celltype=CL:0000148!5.47e-19!10;CL:0000541!5.47e-19!10;CL:0000147!3.09e-13!14;CL:0002567!8.48e-13!3;CL:0000710!6.34e-09!20 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000148,9.07e-75,10;CL:0000541,9.07e-75,10;CL:0000147,2.26e-53,14;CL:0002567,1.21e-46,3;CL:0000710,2.65e-37,20;CL:0000075,1.45e-27,27;CL:0002077,7.99e-22,34;CL:0000333,3.52e-17,41;CL:0002566,7.57e-17,1;CL:0000133,5.51e-12,59;CL:0000221,8.51e-10,72 | |||
|ontology_enrichment_development_v019=CL:0000133;8.15e-07;59 | |ontology_enrichment_development_v019=CL:0000133;8.15e-07;59 | ||
|ontology_enrichment_disease=DOID:1909!6.50e-09!2 | |ontology_enrichment_disease=DOID:1909!6.50e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;5.50e-31;2 | |ontology_enrichment_disease_v019=DOID:1909;5.50e-31;2 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,5.50e-31,2 | |||
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| ||
|short_description=p15@MCF2L | |short_description=p15@MCF2L | ||
}} | }} |
Latest revision as of 15:09, 16 September 2015
Short description: | p15@MCF2L |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_MCF2L_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 23bp_to_ENST00000469558_5end |
EntrezGene: | MCF2L |
HGNC: | 14576 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 9.07e-75 | 10 |
melanoblast | 9.07e-75 | 10 |
pigment cell | 2.26e-53 | 14 |
light melanocyte | 1.21e-46 | 3 |
neurecto-epithelial cell | 2.65e-37 | 20 |
columnar/cuboidal epithelial cell | 1.45e-27 | 27 |
ecto-epithelial cell | 7.99e-22 | 34 |
migratory neural crest cell | 3.52e-17 | 41 |
dark melanocyte | 7.57e-17 | 1 |
neurectodermal cell | 5.51e-12 | 59 |
ectodermal cell | 8.51e-10 | 72 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.93e-16 | 1 |
midbrain nucleus | 1.93e-16 | 1 |
regional part of midbrain | 1.93e-16 | 1 |
midbrain | 1.93e-16 | 1 |
presumptive midbrain | 1.93e-16 | 1 |
midbrain neural tube | 1.93e-16 | 1 |
dorsal plus ventral thalamus | 7.49e-09 | 2 |
thalamic complex | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
melanoma | 5.50e-31 | 2 |