FFCP PHASE1:Hg19::chr7:139168402..139168431,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:139168402..139168431,- to FFCP PHASE1:Hg19::chr7:139168402..139168431,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=346689 | |EntrezGene=346689 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24778 | |HGNC=24778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000393039_5end | |||
|cluster_id=chr7:139168402..139168431,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_1_at_KLRG2_5end | |||
|id=chr7:139168402..139168431,- | |||
|ontology_enrichment_celltype=CL:0000066!3.40e-12!254;CL:0002076!2.14e-11!43;CL:0000039!1.14e-10!7;CL:0000586!1.14e-10!7;CL:0002251!2.85e-08!21;CL:0002322!1.05e-07!5;CL:0000223!1.14e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.49e-20;7!CL:0000586;1.49e-20;7!CL:0002322;1.81e-14;5!CL:0002541;2.51e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.45e-20,7;CL:0000586,1.45e-20,7;CL:0002322,2.20e-14,5;CL:0000066,2.69e-09,253;CL:0002541,2.39e-08,3;CL:0000317,9.90e-07,2;CL:1000448,9.90e-07,2;CL:0002308,9.90e-07,2;CL:0002140,9.90e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.27e-10;10!UBERON:0005564;5.27e-10;10 | |||
|ontology_enrichment_disease=DOID:0050687!1.23e-14!143;DOID:305!7.07e-14!106;DOID:3095!3.40e-13!22;DOID:2994!3.40e-13!22;DOID:162!8.71e-09!235;DOID:14566!3.20e-08!239;DOID:299!3.80e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.47e-11;4!DOID:1612;1.47e-11;4!DOID:299;1.52e-10;25!DOID:3095;3.08e-09;22!DOID:2994;3.08e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.54e-11,4;DOID:1612,1.54e-11,4;DOID:299,1.48e-10,25;DOID:305,2.16e-10,106;DOID:3095,3.19e-09,22;DOID:2994,3.19e-09,22;DOID:0050687,2.07e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001004!2.78e-09!72;UBERON:0004119!2.14e-08!169;UBERON:0000925!2.14e-08!169;UBERON:0006595!2.14e-08!169;UBERON:0001007!6.16e-08!155;UBERON:0001555!6.16e-08!155;UBERON:0007026!6.16e-08!155;UBERON:0000464!4.79e-07!104;UBERON:0004921!7.24e-07!129;UBERON:0004185!7.24e-07!129;UBERON:0000161!8.93e-07!35;UBERON:0000077!9.91e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001041;1.31e-10;14!UBERON:0003124;2.51e-08;3!UBERON:0000920;2.51e-08;3!UBERON:0001044;6.44e-07;6!UBERON:0003293;6.44e-07;6!UBERON:0003294;6.44e-07;6!UBERON:0010047;6.44e-07;6!UBERON:0003408;6.44e-07;6!UBERON:0000167;6.44e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.39e-08,3;UBERON:0001044,6.45e-07,6;UBERON:0003293,6.45e-07,6;UBERON:0003294,6.45e-07,6;UBERON:0010047,6.45e-07,6;UBERON:0000167,6.45e-07,6;UBERON:0002419,9.90e-07,2;UBERON:0007771,9.90e-07,2;UBERON:0003297,9.90e-07,2;UBERON:0001821,9.90e-07,2;UBERON:0003487,9.90e-07,2;UBERON:0001820,9.90e-07,2;UBERON:0005089,9.90e-07,2;UBERON:0005088,9.90e-07,2 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,4.73583874780305,3.33705998505986,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,6.34263271873896,6.62648841607426,4.06678800043314,4.14644220061482,5.55105871926382,4.01475094983413,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.658501712451753,0,0.201057944823262,1.29623823221941,0,0,0,0,0,0,0,0,2.37061319387782,5.15091697256924,0,0,0,0,0,0.141775097242386,0,0,1.53353071666084,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,2.65890789101569,0.200506470303285,0.460404944679482,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,3.25135725052623,17.5591420849199,0.764628819135115,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,4.59412430396938,5.85054221432869,0,0,0,0,0,0,0,0,0,0.495854746082934,1.53752053892085,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.3360697236985,0.490080431962063,0,0,0,0,0,0,0,5.843194924942,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.844501632511974,0.19924798825107,0,5.79445320064835,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,7.0315495493013,4.81029999979076,0,5.12070517284748,0,3.07303986298317,0,0,0,0,0,0,0,0,0,0,2.23077990845765,0.0769502585037971,0,27.8982324309553,4.93667044253747,5.10642648033438,3.82801391678303,1.09917112082235,3.73124343213044,0,0,0,0,0,0,0,0.158936578980379,3.16497096792041,3.26465616318295,0.989471500037586,0.649165919226273,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,0,0,0,0.751617097072463,0.207376382794494,0,0,0.313932918407225,0,1.42304773014896,0,1.90915712168644,0.0979923974143777,0.69647365264322,0,0,0,0,0,3.006659511141,0.176512253383001,0.451961481561065,0,0,0,1.36885967914362,0.320635281006135,0,3.9961921916426,3.16998917739033,0.458146384663663,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,4.5926170114768,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,3.21506296930038,7.15205070305616,4.98528405635022,0,0.77380195455795,0,11.0693446907758,0.630445658393585,0.944182586429966,0,0,1.15149118391667,0,0,0,0,0,0,0,0.656740165994712,0,0.113312091520126,0,0,0,0,0.342173675768659,0,2.13574825135389,0.314408610199332,2.89967338743037,0,0,0,0,0,0,0,0,2.51286554000375,0,0.122026264901963,0,0,0,0.0620964029413835,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82696004375648,0,0,0,0,7.10243328470236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0.839277046316667,0,0.639471856518258,0.323474434190045,0.471797825567689,0.764467467344097,0.509197589862076,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,11.6790026114263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74128883428591,0.496211178389294,0,0.511049710558381,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0.118193840883968,0,0.078493092850514,0,5.88571542958957,0,0.215927591218621,0,0,2.68623139945635,0.116241425368125,0,0,0,0.51215543128185,2.07377898544228,2.15113679410139,0,0,0,4.81124423942505,0,0,3.02009665854039,0,0.365753774946808,0,0,0,0.485710993059139,0.935757853848423,0.397901550322736,0.356760272332706,2.48481380485712,1.97892930141772,0.905777061400041,0,0,0,0.245148321753905,0.942706188406504,0.588925401344836,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,2.75237570042724,0,0,0,0,0,0,0,0,2.14482922219634,28.0812519946698,0.633492505057185,59.4594877395754,31.2644364160706,78.6620340018272,20.5580182219748,0,0.535928260312357,0,0,1.70587185520785,0.476128862927481,0.258355639344024,0.31037357147929,0,5.09177266225319,1.21270313374932,0.217716747896961,2.39563310759697,0.673520530145875,0.286888821570705,0,0,0,0,0,4.69281884806909,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,4.73583874780305,3.33705998505986,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,6.34263271873896,6.62648841607426,4.06678800043314,4.14644220061482,5.55105871926382,4.01475094983413,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.658501712451753,0,0.201057944823262,1.29623823221941,0,0,0,0,0,0,0,0,2.37061319387782,5.15091697256924,0,0,0,0,0,0.141775097242386,0,0,1.53353071666084,0,0,0.414656231081544,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,2.65890789101569,0.200506470303285,0.460404944679482,0,0,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0,0,3.25135725052623,17.5591420849199,0.764628819135115,0,0,0,0,0,0,0,0.206082023295445,0,0.082509499920588,4.59412430396938,5.85054221432869,0,0,0,0,0,0,0,0,0,0.495854746082934,1.53752053892085,0.127612712494584,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,68.3360697236985,0.490080431962063,0,0,0,0,0,0,0,5.843194924942,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0.844501632511974,0.19924798825107,0,5.79445320064835,0,0,0,0,0.179021174675609,0,0.295930216910801,0,0,0,0,0,7.0315495493013,4.81029999979076,0,5.12070517284748,0,3.07303986298317,0,0,0,0,0,0,0,0,0,0,2.23077990845765,0.0769502585037971,0,27.8982324309553,4.93667044253747,5.10642648033438,3.82801391678303,1.09917112082235,3.73124343213044,0,0,0,0,0,0,0,0.158936578980379,3.16497096792041,3.26465616318295,0.989471500037586,0.649165919226273,0.995261931078505,0,0,0,0,0,0.067401132980677,0,0,0,0.586993856796269,0,0,0,0,0,0.751617097072463,0.207376382794494,0,0,0.313932918407225,0,1.42304773014896,0,1.90915712168644,0.0979923974143777,0.69647365264322,0,0,0,0,0,3.006659511141,0.176512253383001,0.451961481561065,0,0,0,1.36885967914362,0.320635281006135,0,3.9961921916426,3.16998917739033,0.458146384663663,0,0,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,4.5926170114768,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,3.21506296930038,7.15205070305616,4.98528405635022,0,0.77380195455795,0,11.0693446907758,0.630445658393585,0.944182586429966,0,0,1.15149118391667,0,0,0,0,0,0,0,0.656740165994712,0,0.113312091520126,0,0,0,0,0.342173675768659,0,2.13574825135389,0.314408610199332,2.89967338743037,0,0,0,0,0,0,0,0,2.51286554000375,0,0.122026264901963,0,0,0,0.0620964029413835,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82696004375648,0,0,0,0,7.10243328470236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853533837553127,0,0,0,0.839277046316667,0,0.639471856518258,0.323474434190045,0.471797825567689,0.764467467344097,0.509197589862076,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,11.6790026114263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74128883428591,0.496211178389294,0,0.511049710558381,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,0.118193840883968,0,0.078493092850514,0,5.88571542958957,0,0.215927591218621,0,0,2.68623139945635,0.116241425368125,0,0,0,0.51215543128185,2.07377898544228,2.15113679410139,0,0,0,4.81124423942505,0,0,3.02009665854039,0,0.365753774946808,0,0,0,0.485710993059139,0.935757853848423,0.397901550322736,0.356760272332706,2.48481380485712,1.97892930141772,0.905777061400041,0,0,0,0.245148321753905,0.942706188406504,0.588925401344836,0,0,0,0,0.0644578879735772,0,0.178553938605658,0,0,0,2.75237570042724,0,0,0,0,0,0,0,0,2.14482922219634,28.0812519946698,0.633492505057185,59.4594877395754,31.2644364160706,78.6620340018272,20.5580182219748,0,0.535928260312357,0,0,1.70587185520785,0.476128862927481,0.258355639344024,0.31037357147929,0,5.09177266225319,1.21270313374932,0.217716747896961,2.39563310759697,0.673520530145875,0.286888821570705,0,0,0,0,0,4.69281884806909,0.122241444182866,0,0.665756774185513,0.402547587182052,0 | ||
|short_description=p1@KLRG2 | |||
}} | }} |
Latest revision as of 16:21, 16 September 2015
Short description: | p1@KLRG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLRG2_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000393039_5end |
EntrezGene: | KLRG2 |
HGNC: | 24778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.45e-20 | 7 |
germ cell | 1.45e-20 | 7 |
embryonic stem cell | 2.20e-14 | 5 |
epithelial cell | 2.69e-09 | 253 |
chorionic membrane mesenchymal stem cell | 2.39e-08 | 3 |
sebum secreting cell | 9.90e-07 | 2 |
epithelial cell of sweat gland | 9.90e-07 | 2 |
epithelial cell of skin gland | 9.90e-07 | 2 |
acinar cell of sebaceous gland | 9.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.39e-08 | 3 |
saliva-secreting gland | 6.45e-07 | 6 |
gland of oral region | 6.45e-07 | 6 |
gland of foregut | 6.45e-07 | 6 |
oral gland | 6.45e-07 | 6 |
oral cavity | 6.45e-07 | 6 |
skin gland | 9.90e-07 | 2 |
epidermis gland | 9.90e-07 | 2 |
gland of integumental system | 9.90e-07 | 2 |
sebaceous gland | 9.90e-07 | 2 |
skin sebaceous gland | 9.90e-07 | 2 |
sweat gland | 9.90e-07 | 2 |
sweat gland placode | 9.90e-07 | 2 |
sebaceous gland placode | 9.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.54e-11 | 4 |
breast cancer | 1.54e-11 | 4 |
adenocarcinoma | 1.48e-10 | 25 |
carcinoma | 2.16e-10 | 106 |
germ cell and embryonal cancer | 3.19e-09 | 22 |
germ cell cancer | 3.19e-09 | 22 |
cell type cancer | 2.07e-08 | 143 |