FFCP PHASE1:Hg19::chr17:61973889..61973921,-: Difference between revisions
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|id=chr17:61973889..61973921,-
|short_description=p1@CSH1
|description=CAGE_peak_1_at_CSH1_5end
|association_with_transcript=0bp_to_ENST00000560805_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1442 | |EntrezGene=1442 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2440 | |HGNC=2440 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000560805_5end | |||
|cluster_id=chr17:61973889..61973921,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_CSH1_5end | |||
|id=chr17:61973889..61973921,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.23e-66;1!UBERON:0004872;8.16e-11;7!UBERON:0005795;5.73e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!5.70e-21!2;UBERON:0000988!2.09e-14!3;UBERON:0001987!2.53e-11!4;UBERON:0004340!2.53e-11!4;UBERON:0003296!3.42e-11!4;UBERON:0010133!3.42e-11!4;UBERON:0003124!5.08e-07!7;UBERON:0001894!6.04e-07!7;UBERON:0006222!6.04e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001987;7.35e-18;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,7.35e-18,4;UBERON:0004340,7.35e-18,4;UBERON:0003124,8.16e-11,7 | |||
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|short_description=p1@CSH1 | |||
}} | }} |
Latest revision as of 18:37, 16 September 2015
Short description: | p1@CSH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSH1_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000560805_5end |
EntrezGene: | CSH1 |
HGNC: | 2440 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data