FFCP PHASE1:Hg19::chr8:139926293..139926315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=169044 | |EntrezGene=169044 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22989 | |HGNC=22989 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-44bp_to_ENST00000484387_5end | |association_with_transcript=-44bp_to_ENST00000484387_5end | ||
|cluster_id=chr8:139926293..139926315,- | |||
|coexpression_cluster_id=C2919 | |||
|description=CAGE_peak_3_at_COL22A1_5end | |description=CAGE_peak_3_at_COL22A1_5end | ||
|id=chr8:139926293..139926315,- | |id=chr8:139926293..139926315,- | ||
|ontology_enrichment_celltype=CL:0000221!5.93e-09!71;CL:0000128!3.75e-08!7;CL:0000126!3.75e-08!7;CL:0000127!3.75e-08!7;CL:0002453!3.75e-08!7 | |ontology_enrichment_celltype=CL:0000221!5.93e-09!71;CL:0000128!3.75e-08!7;CL:0000126!3.75e-08!7;CL:0000127!3.75e-08!7;CL:0002453!3.75e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000569;1.40e-12;4!CL:0000128;3.52e-11;7!CL:0000126;3.52e-11;7!CL:0000127;3.52e-11;7!CL:0002605;1.62e-10;3!CL:0002582;1.68e-09;3!CL:0000047;1.10e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000569,1.33e-12,4;CL:0000011,1.33e-12,4;CL:0000128,2.27e-11,7;CL:0000126,2.27e-11,7;CL:0000127,2.27e-11,7;CL:0002453,2.27e-11,7;CL:0002605,1.57e-10,3;CL:0002582,1.74e-09,3;CL:0000221,4.76e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000011;1.40e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!8.29e-11!309;UBERON:0000119!1.94e-10!312;UBERON:0000922!7.24e-10!612;UBERON:0000924!3.05e-09!173;UBERON:0006601!3.05e-09!173;UBERON:0003076!6.32e-09!15;UBERON:0003057!6.32e-09!15;UBERON:0000073!7.19e-09!94;UBERON:0001016!7.19e-09!94;UBERON:0004121!8.89e-09!169;UBERON:0000468!1.95e-08!659;UBERON:0002346!2.17e-08!90;UBERON:0005743!3.87e-08!86;UBERON:0002050!5.40e-08!605;UBERON:0005423!5.40e-08!605;UBERON:0003075!6.56e-08!86;UBERON:0007284!6.56e-08!86;UBERON:0000153!1.04e-07!129;UBERON:0007811!1.04e-07!129;UBERON:0000025!1.22e-07!194;UBERON:0000923!1.24e-07!604;UBERON:0005291!1.24e-07!604;UBERON:0006598!1.24e-07!604;UBERON:0002532!1.24e-07!604;UBERON:0004111!1.86e-07!241;UBERON:0001049!2.53e-07!57;UBERON:0005068!2.53e-07!57;UBERON:0006241!2.53e-07!57;UBERON:0007135!2.53e-07!57;UBERON:0001017!3.11e-07!82;UBERON:0004733!4.87e-07!12;UBERON:0002028!4.87e-07!12;UBERON:0007277!4.87e-07!12;UBERON:0000475!6.95e-07!365;UBERON:0000480!6.97e-07!626;UBERON:0000033!7.69e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.66e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.68e-08,2 | |||
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| ||
|short_description=p3@COL22A1 | |short_description=p3@COL22A1 | ||
}} | }} |
Latest revision as of 18:46, 16 September 2015
Short description: | p3@COL22A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_COL22A1_5end |
Coexpression cluster: | C2919_smallcell_Smooth_skeletal_small_Urothelial_pituitary_gastrointestinal |
Association with transcript: | -44bp_to_ENST00000484387_5end |
EntrezGene: | COL22A1 |
HGNC: | 22989 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac mesenchymal cell | 1.33e-12 | 4 |
migratory trunk neural crest cell | 1.33e-12 | 4 |
oligodendrocyte | 2.27e-11 | 7 |
macroglial cell | 2.27e-11 | 7 |
astrocyte | 2.27e-11 | 7 |
oligodendrocyte precursor cell | 2.27e-11 | 7 |
astrocyte of the cerebral cortex | 1.57e-10 | 3 |
visceral preadipocyte | 1.74e-09 | 3 |
ectodermal cell | 4.76e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.68e-08 | 2 |