FFCP PHASE1:Hg19::chr20:48184612..48184630,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5740 | |EntrezGene=5740 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9603 | |HGNC=9603 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENST00000478971_5end | |association_with_transcript=22bp_to_ENST00000478971_5end | ||
|cluster_id=chr20:48184612..48184630,- | |||
|coexpression_cluster_id=C517 | |||
|description=CAGE_peak_2_at_PTGIS_5end | |description=CAGE_peak_2_at_PTGIS_5end | ||
|id=chr20:48184612..48184630,- | |id=chr20:48184612..48184630,- | ||
|ontology_enrichment_celltype=CL:0000055!6.22e-21!180;CL:0000680!1.49e-15!57;CL:0000056!1.49e-15!57;CL:0000355!1.49e-15!57;CL:0000183!2.46e-15!59;CL:0000187!2.58e-15!54;CL:0000192!1.46e-14!42;CL:0000514!1.46e-14!42;CL:0000359!3.25e-14!32;CL:0000393!6.54e-14!60;CL:0000211!6.54e-14!60;CL:0000057!1.52e-11!75;CL:0002494!1.47e-09!16;CL:0000222!3.25e-09!119;CL:0002334!3.84e-08!12 | |ontology_enrichment_celltype=CL:0000055!6.22e-21!180;CL:0000680!1.49e-15!57;CL:0000056!1.49e-15!57;CL:0000355!1.49e-15!57;CL:0000183!2.46e-15!59;CL:0000187!2.58e-15!54;CL:0000192!1.46e-14!42;CL:0000514!1.46e-14!42;CL:0000359!3.25e-14!32;CL:0000393!6.54e-14!60;CL:0000211!6.54e-14!60;CL:0000057!1.52e-11!75;CL:0002494!1.47e-09!16;CL:0000222!3.25e-09!119;CL:0002334!3.84e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;2.04e-13;32!CL:0002494;3.91e-11;16!CL:0000192;1.36e-10;43!CL:0002334;1.25e-09;12!CL:0000499;2.18e-07;28!CL:0000187;2.38e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.65e-14,32;CL:0000192,1.05e-13,43;CL:0000514,1.05e-13,43;CL:0000187,1.92e-13,55;CL:0000680,1.03e-12,58;CL:0000056,1.03e-12,58;CL:0000355,1.03e-12,58;CL:0000057,1.79e-12,76;CL:0000393,1.76e-11,61;CL:0000211,1.76e-11,61;CL:0002494,2.67e-11,16;CL:0002334,1.41e-09,12;CL:0000499,1.83e-07,28;CL:0000222,2.10e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;1.36e-10;43!CL:0000355;8.01e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002385!7.34e-18!63;UBERON:0001015!7.34e-18!63;UBERON:0000383!7.34e-18!63;UBERON:0001134!6.37e-17!61;UBERON:0002036!6.37e-17!61;UBERON:0003082!6.37e-17!61;UBERON:0004872!1.19e-16!84;UBERON:0007100!4.29e-15!27;UBERON:0000948!5.74e-14!24;UBERON:0005498!5.74e-14!24;UBERON:0004140!5.74e-14!24;UBERON:0009881!5.74e-14!24;UBERON:0004141!5.74e-14!24;UBERON:0003084!5.74e-14!24;UBERON:0007005!5.74e-14!24;UBERON:0004139!5.74e-14!24;UBERON:0004291!5.74e-14!24;UBERON:0004290!5.98e-14!70;UBERON:0000914!2.42e-13!83;UBERON:0002329!2.42e-13!83;UBERON:0003077!2.42e-13!83;UBERON:0003059!2.42e-13!83;UBERON:0007282!2.42e-13!83;UBERON:0009618!2.42e-13!83;UBERON:0007285!2.42e-13!83;UBERON:0001637!1.04e-12!42;UBERON:0003509!1.04e-12!42;UBERON:0004572!1.04e-12!42;UBERON:0001009!9.31e-12!113;UBERON:0004573!2.18e-11!33;UBERON:0004571!2.18e-11!33;UBERON:0000486!2.73e-11!82;UBERON:0002100!5.07e-11!216;UBERON:0004535!7.55e-11!110;UBERON:0003914!1.29e-10!118;UBERON:0001981!1.30e-10!60;UBERON:0007500!1.30e-10!60;UBERON:0004537!1.30e-10!60;UBERON:0006965!1.30e-10!60;UBERON:0005256!1.42e-10!143;UBERON:0002049!4.57e-10!79;UBERON:0007798!4.57e-10!79;UBERON:0000475!1.66e-08!365;UBERON:0003103!5.44e-08!69;UBERON:0000055!1.01e-07!69;UBERON:0000481!1.22e-07!347;UBERON:0003104!3.69e-07!238;UBERON:0009142!3.69e-07!238;UBERON:0000490!7.02e-07!138;UBERON:0004458!9.22e-07!49 | |ontology_enrichment_uberon=UBERON:0002385!7.34e-18!63;UBERON:0001015!7.34e-18!63;UBERON:0000383!7.34e-18!63;UBERON:0001134!6.37e-17!61;UBERON:0002036!6.37e-17!61;UBERON:0003082!6.37e-17!61;UBERON:0004872!1.19e-16!84;UBERON:0007100!4.29e-15!27;UBERON:0000948!5.74e-14!24;UBERON:0005498!5.74e-14!24;UBERON:0004140!5.74e-14!24;UBERON:0009881!5.74e-14!24;UBERON:0004141!5.74e-14!24;UBERON:0003084!5.74e-14!24;UBERON:0007005!5.74e-14!24;UBERON:0004139!5.74e-14!24;UBERON:0004291!5.74e-14!24;UBERON:0004290!5.98e-14!70;UBERON:0000914!2.42e-13!83;UBERON:0002329!2.42e-13!83;UBERON:0003077!2.42e-13!83;UBERON:0003059!2.42e-13!83;UBERON:0007282!2.42e-13!83;UBERON:0009618!2.42e-13!83;UBERON:0007285!2.42e-13!83;UBERON:0001637!1.04e-12!42;UBERON:0003509!1.04e-12!42;UBERON:0004572!1.04e-12!42;UBERON:0001009!9.31e-12!113;UBERON:0004573!2.18e-11!33;UBERON:0004571!2.18e-11!33;UBERON:0000486!2.73e-11!82;UBERON:0002100!5.07e-11!216;UBERON:0004535!7.55e-11!110;UBERON:0003914!1.29e-10!118;UBERON:0001981!1.30e-10!60;UBERON:0007500!1.30e-10!60;UBERON:0004537!1.30e-10!60;UBERON:0006965!1.30e-10!60;UBERON:0005256!1.42e-10!143;UBERON:0002049!4.57e-10!79;UBERON:0007798!4.57e-10!79;UBERON:0000475!1.66e-08!365;UBERON:0003103!5.44e-08!69;UBERON:0000055!1.01e-07!69;UBERON:0000481!1.22e-07!347;UBERON:0003104!3.69e-07!238;UBERON:0009142!3.69e-07!238;UBERON:0000490!7.02e-07!138;UBERON:0004458!9.22e-07!49 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.37e-16;25!UBERON:0000948;4.93e-15;22!UBERON:0004573;1.10e-09;33!UBERON:0004571;1.10e-09;33!UBERON:0001637;8.53e-09;42!UBERON:0003509;8.53e-09;42!UBERON:0004572;8.53e-09;42!UBERON:0004457;1.75e-07;9!UBERON:0000042;1.75e-07;9 | |||
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| ||
|short_description=p2@PTGIS | |short_description=p2@PTGIS | ||
}} | }} |
Latest revision as of 19:32, 16 September 2015
Short description: | p2@PTGIS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTGIS_5end |
Coexpression cluster: | C517_Mesothelial_Synoviocyte_mesothelioma_Fibroblast_Smooth_Preadipocyte_tenocyte |
Association with transcript: | 22bp_to_ENST00000478971_5end |
EntrezGene: | PTGIS |
HGNC: | 9603 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.65e-14 | 32 |
smooth muscle cell | 1.05e-13 | 43 |
smooth muscle myoblast | 1.05e-13 | 43 |
muscle cell | 1.92e-13 | 55 |
muscle precursor cell | 1.03e-12 | 58 |
myoblast | 1.03e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.03e-12 | 58 |
fibroblast | 1.79e-12 | 76 |
electrically responsive cell | 1.76e-11 | 61 |
electrically active cell | 1.76e-11 | 61 |
cardiocyte | 2.67e-11 | 16 |
preadipocyte | 1.41e-09 | 12 |
stromal cell | 1.83e-07 | 28 |
mesodermal cell | 2.10e-07 | 121 |