FFCP PHASE1:Hg19::chr12:120720030..120720046,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=31358 | |HGNC=31358 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-59bp_to_ENST00000426182_5end | |association_with_transcript=-59bp_to_ENST00000426182_5end | ||
|cluster_id=chr12:120720030..120720046,+ | |||
|coexpression_cluster_id=C2157 | |||
|description=CAGE_peak_1_at_NME2P1_5end | |description=CAGE_peak_1_at_NME2P1_5end | ||
|id=chr12:120720030..120720046,+ | |id=chr12:120720030..120720046,+ | ||
|ontology_enrichment_celltype=CL:0002321!9.46e-30!248;CL:0000220!6.23e-29!246;CL:0000012!3.48e-21!682;CL:0000548!5.68e-21!679;CL:0000004!5.68e-21!679;CL:0000255!5.68e-21!679;CL:0000066!2.02e-19!254;CL:0000055!4.98e-19!180;CL:0000222!5.37e-18!119;CL:0000183!9.80e-17!59;CL:0000393!1.31e-16!60;CL:0000211!1.31e-16!60;CL:0000187!1.34e-14!54;CL:0000680!1.81e-14!57;CL:0000056!1.81e-14!57;CL:0000355!1.81e-14!57;CL:0000144!7.19e-13!625;CL:0000192!2.58e-12!42;CL:0000514!2.58e-12!42;CL:0000359!2.48e-10!32;CL:0000003!2.78e-09!722;CL:0002371!5.22e-08!591;CL:0000221!6.22e-08!71 | |ontology_enrichment_celltype=CL:0002321!9.46e-30!248;CL:0000220!6.23e-29!246;CL:0000012!3.48e-21!682;CL:0000548!5.68e-21!679;CL:0000004!5.68e-21!679;CL:0000255!5.68e-21!679;CL:0000066!2.02e-19!254;CL:0000055!4.98e-19!180;CL:0000222!5.37e-18!119;CL:0000183!9.80e-17!59;CL:0000393!1.31e-16!60;CL:0000211!1.31e-16!60;CL:0000187!1.34e-14!54;CL:0000680!1.81e-14!57;CL:0000056!1.81e-14!57;CL:0000355!1.81e-14!57;CL:0000144!7.19e-13!625;CL:0000192!2.58e-12!42;CL:0000514!2.58e-12!42;CL:0000359!2.48e-10!32;CL:0000003!2.78e-09!722;CL:0002371!5.22e-08!591;CL:0000221!6.22e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.25e-10;32!CL:0000192;5.63e-09;43!CL:0000393;6.54e-09;61!CL:0000211;6.54e-09;61!CL:0000187;1.19e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.49e-31,250;CL:0000066,1.04e-19,253;CL:0000222,5.24e-19,121;CL:0000393,8.77e-17,61;CL:0000211,8.77e-17,61;CL:0000187,1.00e-14,55;CL:0000680,1.31e-14,58;CL:0000056,1.31e-14,58;CL:0000355,1.31e-14,58;CL:0000192,2.30e-12,43;CL:0000514,2.30e-12,43;CL:0000359,2.53e-10,32;CL:0000221,6.92e-08,72 | |||
|ontology_enrichment_development_v019=CL:0000514;5.63e-09;43!CL:0000355;3.52e-08;58 | |||
|ontology_enrichment_disease=DOID:14566!1.51e-07!239;DOID:162!2.91e-07!235;DOID:0050687!4.47e-07!143 | |ontology_enrichment_disease=DOID:14566!1.51e-07!239;DOID:162!2.91e-07!235;DOID:0050687!4.47e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.20e-07,239;DOID:0050687,6.84e-07,143;DOID:162,8.28e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.13e-18!238;UBERON:0009142!6.13e-18!238;UBERON:0000486!9.73e-18!82;UBERON:0005256!1.90e-17!143;UBERON:0002100!1.21e-16!216;UBERON:0000914!3.52e-16!83;UBERON:0002329!3.52e-16!83;UBERON:0003077!3.52e-16!83;UBERON:0003059!3.52e-16!83;UBERON:0007282!3.52e-16!83;UBERON:0009618!3.52e-16!83;UBERON:0007285!3.52e-16!83;UBERON:0004290!3.64e-16!70;UBERON:0000490!4.52e-15!138;UBERON:0001134!9.19e-14!61;UBERON:0002036!9.19e-14!61;UBERON:0003082!9.19e-14!61;UBERON:0003914!1.53e-13!118;UBERON:0002385!1.04e-12!63;UBERON:0001015!1.04e-12!63;UBERON:0000383!1.04e-12!63;UBERON:0002049!4.08e-12!79;UBERON:0007798!4.08e-12!79;UBERON:0000481!1.27e-11!347;UBERON:0004872!2.25e-11!84;UBERON:0001637!1.75e-10!42;UBERON:0003509!1.75e-10!42;UBERON:0004572!1.75e-10!42;UBERON:0001981!1.88e-10!60;UBERON:0007500!1.88e-10!60;UBERON:0004537!1.88e-10!60;UBERON:0006965!1.88e-10!60;UBERON:0000119!2.38e-10!312;UBERON:0000483!6.83e-10!309;UBERON:0000055!1.15e-09!69;UBERON:0004535!1.88e-08!110;UBERON:0001009!1.02e-07!113;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33 | |ontology_enrichment_uberon=UBERON:0003104!6.13e-18!238;UBERON:0009142!6.13e-18!238;UBERON:0000486!9.73e-18!82;UBERON:0005256!1.90e-17!143;UBERON:0002100!1.21e-16!216;UBERON:0000914!3.52e-16!83;UBERON:0002329!3.52e-16!83;UBERON:0003077!3.52e-16!83;UBERON:0003059!3.52e-16!83;UBERON:0007282!3.52e-16!83;UBERON:0009618!3.52e-16!83;UBERON:0007285!3.52e-16!83;UBERON:0004290!3.64e-16!70;UBERON:0000490!4.52e-15!138;UBERON:0001134!9.19e-14!61;UBERON:0002036!9.19e-14!61;UBERON:0003082!9.19e-14!61;UBERON:0003914!1.53e-13!118;UBERON:0002385!1.04e-12!63;UBERON:0001015!1.04e-12!63;UBERON:0000383!1.04e-12!63;UBERON:0002049!4.08e-12!79;UBERON:0007798!4.08e-12!79;UBERON:0000481!1.27e-11!347;UBERON:0004872!2.25e-11!84;UBERON:0001637!1.75e-10!42;UBERON:0003509!1.75e-10!42;UBERON:0004572!1.75e-10!42;UBERON:0001981!1.88e-10!60;UBERON:0007500!1.88e-10!60;UBERON:0004537!1.88e-10!60;UBERON:0006965!1.88e-10!60;UBERON:0000119!2.38e-10!312;UBERON:0000483!6.83e-10!309;UBERON:0000055!1.15e-09!69;UBERON:0004535!1.88e-08!110;UBERON:0001009!1.02e-07!113;UBERON:0004573!1.53e-07!33;UBERON:0004571!1.53e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;1.50e-07;74!UBERON:0001637;1.60e-07;42!UBERON:0003509;1.60e-07;42!UBERON:0004572;1.60e-07;42!UBERON:0007500;5.45e-07;56!UBERON:0001981;5.45e-07;56!UBERON:0004537;5.45e-07;56 | |||
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| ||
|short_description=p1@NME2P1 | |short_description=p1@NME2P1 | ||
}} | }} |
Latest revision as of 19:43, 16 September 2015
Short description: | p1@NME2P1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NME2P1_5end |
Coexpression cluster: | C2157_Mallassezderived_Smooth_Alveolar_Bronchial_Keratocytes_Tracheal_mesothelioma |
Association with transcript: | -59bp_to_ENST00000426182_5end |
EntrezGene: | NA |
HGNC: | 31358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.49e-31 | 250 |
epithelial cell | 1.04e-19 | 253 |
mesodermal cell | 5.24e-19 | 121 |
electrically responsive cell | 8.77e-17 | 61 |
electrically active cell | 8.77e-17 | 61 |
muscle cell | 1.00e-14 | 55 |
muscle precursor cell | 1.31e-14 | 58 |
myoblast | 1.31e-14 | 58 |
multi-potent skeletal muscle stem cell | 1.31e-14 | 58 |
smooth muscle cell | 2.30e-12 | 43 |
smooth muscle myoblast | 2.30e-12 | 43 |
vascular associated smooth muscle cell | 2.53e-10 | 32 |
ectodermal cell | 6.92e-08 | 72 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.20e-07 | 239 |
cell type cancer | 6.84e-07 | 143 |
cancer | 8.28e-07 | 235 |