FFCP PHASE1:Hg19::chr2:30480668..30480672,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81606 | |EntrezGene=81606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29532 | |HGNC=29532 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-222bp_to_AK023425_5end | |association_with_transcript=-222bp_to_AK023425_5end | ||
|cluster_id=chr2:30480668..30480672,+ | |||
|description=CAGE_peak_2_at_LBH_5end | |description=CAGE_peak_2_at_LBH_5end | ||
|id=chr2:30480668..30480672,+ | |id=chr2:30480668..30480672,+ | ||
|ontology_enrichment_celltype=CL:0000838!2.17e-10!52;CL:0000542!2.64e-10!53;CL:0000051!2.64e-10!53;CL:0000791!1.09e-08!18;CL:0000789!1.09e-08!18;CL:0002420!1.09e-08!18;CL:0002419!1.09e-08!18;CL:0000790!1.09e-08!18;CL:0000625!2.09e-07!11 | |ontology_enrichment_celltype=CL:0000838!2.17e-10!52;CL:0000542!2.64e-10!53;CL:0000051!2.64e-10!53;CL:0000791!1.09e-08!18;CL:0000789!1.09e-08!18;CL:0002420!1.09e-08!18;CL:0002419!1.09e-08!18;CL:0000790!1.09e-08!18;CL:0000625!2.09e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.67e-10;18!CL:0000789;4.67e-10;18!CL:0002419;4.67e-10;18!CL:0000625;2.19e-09;11!CL:0000084;6.08e-08;25!CL:0000236;8.05e-08;13!CL:0000542;1.25e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,7.14e-12,52;CL:0000542,1.93e-11,53;CL:0000051,1.93e-11,53;CL:0000791,8.11e-10,18;CL:0000789,8.11e-10,18;CL:0002420,8.11e-10,18;CL:0002419,8.11e-10,18;CL:0000790,8.11e-10,18;CL:0000625,2.13e-09,11;CL:0000084,9.80e-08,25;CL:0000827,9.80e-08,25;CL:0000236,2.81e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;4.67e-10;18!CL:0000051;1.25e-07;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.45e-08;6!UBERON:0002358;6.45e-08;6!UBERON:0003684;6.45e-08;6!UBERON:0001178;6.45e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,6.87e-08,6;UBERON:0002358,6.87e-08,6;UBERON:0003684,6.87e-08,6;UBERON:0001178,6.87e-08,6 | |||
|phase1_expression=3.45188920614058,9.20632252731228,16.6326196833246,24.0175916047513,12.5149106439641,15.7020934338066,2.53299878168311,0.631719873426831,0,3.93174298402414,0.697801167972428,1.09220686065086,1.05506791291381,0,0,0,0.602694528023977,0,0,0.861847406537515,0.612002073732759,0,0.572471974262113,0.547497700291537,0.251085279189606,0.382067028739756,0.410502947249729,0.314843125254717,0.393364276848904,0.767658796194425,0.154816123316076,0.919421224478927,0.30120591877825,0,2.01414721508784,0,0.293600439334847,0,1.40381113229099,0.868043482863407,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0.211255286311942,0,0,0,0,0,0,0,0,10.5597746676794,6.00752472388345,4.44754626931777,3.84057200309856,3.60356388332411,9.77079147922622,5.2883589822789,4.77026877267682,1.70763890732835,1.76171156811282,3.82273228125229,0,0,0,2.360517241366,10.2182798314783,1.23360899399706,0.334372990781356,0.977766799900771,0,13.6378709885538,0.557052284425868,1.17842362989935,1.32920336750173,4.87446954777028,1.5370958367081,5.72261129263464,1.15106533222573,9.39590060471884,0.869409257205157,0.444859689486181,0.802622484269139,9.40819714244791,0.339928028092699,0.383220493601921,1.03088233644789,4.55435445635105,7.32700452945422,5.85975108470777,4.75226022224187,8.58278178743305,5.11946444617674,8.74515085866421,4.97232229292435,4.92676798152628,0.604820229674197,7.2208852861547,5.06885413589796,0,0,0.895037932904712,1.0843174571537,13.0347856765331,6.37324683427624,8.74814541756209,2.91980922181582,0.378139268656271,1.77383517970051,1.84453049955565,0.982343066232845,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0.33472061276467,3.22263453687318,0.760272105718513,0.24406205754817,0,0.81014194788176,0,0,0,0,0,0,0,0,0,4.96971951695318,0.759783069987479,0.132409180813219,0.573673241497627,1.06400514659507,1.12135520028461,0,1.2333377420858,0,0.134710672069688,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0.23486899728753,0.323745888736263,0.421352420106746,0,0.122834317311768,0,0,1.48360157567134,0,0,0,0,0,2.19488810440419,0,0.600952235626387,0.113432183160021,1.61450672119976,2.77624605464138,1.27159140695737,0.900273288253207,8.75946498526731,6.44101350114073,3.35010341396862,2.70042131586026,14.0309287432126,5.80597680761463,4.05019554026117,1.2931684545505,1.77504796258307,12.4932601802274,4.57813599238317,0.966304265816484,1.36373060295417,0,0.243947412259191,0.530119073285941,0.232387885739037,0.310983165046111,0,0.36497735907583,0,1.28648187638577,0,3.71494342425583,6.49691533502627,0.118306800039844,0,0,0,0,0,0,0,0,0,1.40241773803446,2.4694440679884,4.41026134156626,0,0,0.590789906681404,0.882926198829301,0.983907508344908,0.343135620597051,0,0,0,0.277765335475589,0,0,0,1.27523445472584,1.29149563659404,0.288732895522148,0.462985512576611,1.71228737011138,0,0,0,0,0,0,0.671928512795438,0,0,0,0,4.43396914106349,3.43388892651582,0,0,0.75745460055828,0.126995788584338,1.14596527667483,0,1.71072446022705,0.205654985406647,0,0,0,0,0,0,0,0,3.19125739901845,5.2003718455683,0.257207374262142,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,1.12085143993527,0.788123040807709,8.40947541952118,3.59360501583295,0.254094624222463,0,0,0.670065061337395,0,0,0,0,0.24538298343828,0,0,1.66376689224646,1.07057393278297,0.788512075169673,0.702848489956279,0.601892199455438,6.82222512167955,1.03473071292505,1.99267679560631,0.921845842708516,0.0868836144680828,0.391602314925481,1.02943027143257,0.206768026122887,1.07857100409308,0.320182673410333,0,3.32870879020994,2.72151263996712,3.47350930946288,3.52962538562544,8.70046292742528,9.09787959715477,18.933168215468,6.4341568457443,10.3892646511494,0,0,0.0821271560138091,0,0.348631135379878,0.725156697549733,1.20303882181971,0.920809889358963,1.49258782613989,0,2.88473712910733,0.902399225814824,0.231046011313244,0,0,1.89992932007176,1.13733384070897,0.850468526382578,0.215915916102139,0,0.541892875087706,1.00337954770971,0,0,0,3.94667777962682,3.66009631434861,2.56450125116389,7.54433685109323,0.976135183992909,2.36994326789761,0.27470839445503,0.41254749960294,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0.413509717453592,0.751941714077915,0.725083469571143,0,0.534192213880424,0.165284915360978,0.384380134730212,0.127612712494584,0,0.929691098594572,0.94443704049192,1.3940745403212,0,0.532306030317022,0,0,1.00187420719394,0,1.58189712359363,0.38126038784765,3.07077349573601,0.855877976067841,0.636406495851874,0,2.15846949099978,0.274537029736055,0.117812402345686,1.01091240786658,6.34041284692033,1.26377536871694,0.48763373908959,0,1.05650146756755,3.95849743083159,0,1.13008116620243,2.2054613741845,1.32687795048244,2.19225442626881,0,0,0.811641507850816,0.61964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| ||
|short_description=p2@LBH | |short_description=p2@LBH | ||
}} | }} |
Latest revision as of 21:57, 16 September 2015
Short description: | p2@LBH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LBH_5end |
Coexpression cluster: | NA |
Association with transcript: | -222bp_to_AK023425_5end |
EntrezGene: | LBH |
HGNC: | 29532 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 7.14e-12 | 52 |
lymphocyte | 1.93e-11 | 53 |
common lymphoid progenitor | 1.93e-11 | 53 |
mature alpha-beta T cell | 8.11e-10 | 18 |
alpha-beta T cell | 8.11e-10 | 18 |
immature T cell | 8.11e-10 | 18 |
mature T cell | 8.11e-10 | 18 |
immature alpha-beta T cell | 8.11e-10 | 18 |
CD8-positive, alpha-beta T cell | 2.13e-09 | 11 |
T cell | 9.80e-08 | 25 |
pro-T cell | 9.80e-08 | 25 |
B cell | 2.81e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
omentum | 6.87e-08 | 6 |
peritoneum | 6.87e-08 | 6 |
abdominal cavity | 6.87e-08 | 6 |
visceral peritoneum | 6.87e-08 | 6 |