FFCP PHASE1:Hg19::chr2:30864583..30864594,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=253558 | |EntrezGene=253558 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=26756 | |HGNC=26756 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=110bp_to_AK023269_5end | |association_with_transcript=110bp_to_AK023269_5end | ||
|cluster_id=chr2:30864583..30864594,+ | |||
|description=CAGE_peak_18_at_LCLAT1_5end | |description=CAGE_peak_18_at_LCLAT1_5end | ||
|id=chr2:30864583..30864594,+ | |id=chr2:30864583..30864594,+ | ||
|ontology_enrichment_celltype=CL:0002368!9.53e-08!13;CL:0002076!5.17e-07!43 | |ontology_enrichment_celltype=CL:0002368!9.53e-08!13;CL:0002076!5.17e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0000062;2.45e-12;9!CL:0002321;5.55e-08;15 | |ontology_enrichment_celltype_v019=CL:0000333;4.21e-21;5!CL:0000062;2.45e-12;9!CL:0002321;5.55e-08;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.37e-10,11;CL:0000375,2.37e-10,11;CL:0000335,2.37e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000335;2.37e-10;11 | |ontology_enrichment_development_v019=CL:0000335;2.37e-10;11 | ||
|ontology_enrichment_disease=DOID:171!3.44e-18!10;DOID:169!7.07e-13!6;DOID:3095!1.10e-11!22;DOID:2994!1.10e-11!22;DOID:0050687!1.65e-09!143;DOID:14566!3.35e-09!239;DOID:162!3.54e-08!235;DOID:3910!2.25e-07!2 | |ontology_enrichment_disease=DOID:171!3.44e-18!10;DOID:169!7.07e-13!6;DOID:3095!1.10e-11!22;DOID:2994!1.10e-11!22;DOID:0050687!1.65e-09!143;DOID:14566!3.35e-09!239;DOID:162!3.54e-08!235;DOID:3910!2.25e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3347;2.55e-98;1!DOID:169;7.67e-18;6!DOID:201;9.07e-18;6!DOID:0060100;9.07e-18;6!DOID:171;2.73e-11;10 | |ontology_enrichment_disease_v019=DOID:3347;2.55e-98;1!DOID:169;7.67e-18;6!DOID:201;9.07e-18;6!DOID:0060100;9.07e-18;6!DOID:171;2.73e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:3347,2.55e-98,1;DOID:169,7.67e-18,6;DOID:201,9.07e-18,6;DOID:0060100,9.07e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000013!2.94e-10!5;UBERON:0002410!2.94e-10!5;UBERON:0000010!3.77e-08!8;UBERON:0004903!2.25e-07!2;UBERON:0002173!2.25e-07!2;UBERON:0002186!2.25e-07!2 | |ontology_enrichment_uberon=UBERON:0000013!2.94e-10!5;UBERON:0002410!2.94e-10!5;UBERON:0000010!3.77e-08!8;UBERON:0004903!2.25e-07!2;UBERON:0002173!2.25e-07!2;UBERON:0002186!2.25e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8!UBERON:0001474;7.60e-07;18 | |ontology_enrichment_uberon_v019=UBERON:0000013;4.21e-21;5!UBERON:0002410;4.21e-21;5!UBERON:0000010;2.19e-12;8!UBERON:0001474;7.60e-07;18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,4.21e-21,5;UBERON:0002410,4.21e-21,5;UBERON:0000010,2.19e-12,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.124252535565433,0,0.407712618220842,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.146552233678082,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01909471910709,0.157265941855896,0.218419276384028,0,0.212574920101683,0.123935764259002,0.558644917973244,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.11796972334774,0,0,0,1.3807198521202,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p18@LCLAT1 | |short_description=p18@LCLAT1 | ||
}} | }} |
Latest revision as of 22:17, 16 September 2015
Short description: | p18@LCLAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_LCLAT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 110bp_to_AK023269_5end |
EntrezGene: | LCLAT1 |
HGNC: | 26756 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.37e-10 | 11 |
osteoprogenitor cell | 2.37e-10 | 11 |
mesenchyme condensation cell | 2.37e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 4.21e-21 | 5 |
autonomic nervous system | 4.21e-21 | 5 |
peripheral nervous system | 2.19e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 2.55e-98 | 1 |
neuroendocrine tumor | 7.67e-18 | 6 |
connective tissue cancer | 9.07e-18 | 6 |
musculoskeletal system cancer | 9.07e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |