FFCP PHASE1:Hg19::chr11:16403882..16403908,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55553 | |EntrezGene=55553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16421 | |HGNC=16421 | ||
|TSSclassifier=strong | |||
|UniProt=E9PN02 | |UniProt=E9PN02 | ||
|association_with_transcript=35bp_to_ENST00000526673_5end | |||
|cluster_id=chr11:16403882..16403908,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_9_at_SOX6_5end | |||
|id=chr11:16403882..16403908,- | |||
|ontology_enrichment_celltype=CL:0000764!2.03e-13!2;CL:0000765!2.03e-13!2;CL:0000050!2.03e-13!2;CL:0000038!2.03e-13!2;CL:0000558!2.03e-13!2;CL:0000547!2.03e-13!2;CL:0000549!2.03e-13!2;CL:0000550!2.03e-13!2;CL:0000552!2.03e-13!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;8.70e-23;2!CL:0000558;8.70e-23;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,8.70e-23,2;CL:0000765,8.70e-23,2;CL:0000050,8.70e-23,2;CL:0000038,8.70e-23,2;CL:0000558,8.70e-23,2;CL:0000547,8.70e-23,2;CL:0000549,8.70e-23,2;CL:0000550,8.70e-23,2;CL:0000552,8.70e-23,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!3.45e-18!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.53e-21;8!DOID:8692;2.49e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.39e-21,8;DOID:8692,2.40e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.86e-24!15;UBERON:0000179!5.86e-24!15;UBERON:0000463!5.86e-24!15;UBERON:0003127!5.40e-12!2;UBERON:0007023!7.31e-11!115;UBERON:0007029!5.45e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.72e-43;15!UBERON:0000179;4.72e-43;15!UBERON:0000463;4.72e-43;15!UBERON:0002390;4.92e-24;32!UBERON:0002193;1.89e-12;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.34e-43,15;UBERON:0000179,4.34e-43,15;UBERON:0000463,4.34e-43,15;UBERON:0007023,1.57e-09,114;UBERON:0002390,2.42e-07,98;UBERON:0003061,2.42e-07,98 | |||
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|short_description=p9@SOX6 | |||
}} | }} |
Latest revision as of 22:57, 16 September 2015
Short description: | p9@SOX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SOX6_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 35bp_to_ENST00000526673_5end |
EntrezGene: | SOX6 |
HGNC: | 16421 |
UniProt: | E9PN02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 8.70e-23 | 2 |
erythroblast | 8.70e-23 | 2 |
megakaryocyte-erythroid progenitor cell | 8.70e-23 | 2 |
erythroid progenitor cell | 8.70e-23 | 2 |
reticulocyte | 8.70e-23 | 2 |
proerythroblast | 8.70e-23 | 2 |
basophilic erythroblast | 8.70e-23 | 2 |
polychromatophilic erythroblast | 8.70e-23 | 2 |
orthochromatic erythroblast | 8.70e-23 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.34e-43 | 15 |
haemolymphatic fluid | 4.34e-43 | 15 |
organism substance | 4.34e-43 | 15 |
adult organism | 1.57e-09 | 114 |
hematopoietic system | 2.42e-07 | 98 |
blood island | 2.42e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.39e-21 | 8 |
myeloid leukemia | 2.40e-08 | 31 |