FFCP PHASE1:Hg19::chr13:28896641..28896653,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:28896641..28896653,- to FFCP PHASE1:Hg19::chr13:28896641..28896653,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2321 | |EntrezGene=2321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3763 | |HGNC=3763 | ||
|TSSclassifier=strong | |||
|UniProt=B2BF48 | |UniProt=B2BF48 | ||
|association_with_transcript=116bp_to_ENST00000543394,uc010aap.2_5end | |||
|cluster_id=chr13:28896641..28896653,- | |||
|coexpression_cluster_id=C3362 | |||
|description=CAGE_peak_5_at_FLT1_5end | |||
|id=chr13:28896641..28896653,- | |||
|ontology_enrichment_celltype=CL:0002594!3.07e-20!4;CL:0002583!1.92e-10!2;CL:0000055!4.98e-08!180;CL:0000187!9.34e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002594;2.58e-74;4!CL:0002568;1.84e-34;1!CL:0002545;1.17e-17;2!CL:0002583;1.17e-17;2!CL:0000359;4.30e-09;32!CL:0002569;7.17e-07;6!CL:0002544;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,2.58e-74,4;CL:0002568,1.84e-34,1;CL:0002545,1.07e-17,2;CL:0002583,1.27e-17,2;CL:0000359,4.57e-10,32;CL:0000192,1.14e-07,43;CL:0000514,1.14e-07,43;CL:0002569,7.17e-07,6;CL:0002544,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!3.07e-20!4;UBERON:0002049!2.18e-07!79;UBERON:0007798!2.18e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;2.58e-74;4!UBERON:0010260;1.24e-33;9!UBERON:0005800;1.17e-17;2!UBERON:0001515;1.17e-17;2!UBERON:0001637;2.47e-08;42!UBERON:0003509;2.47e-08;42!UBERON:0004572;2.47e-08;42!UBERON:0002072;7.25e-08;5!UBERON:0003914;3.09e-07;74!UBERON:0003422;7.17e-07;6!UBERON:0002049;9.61e-07;75!UBERON:0007798;9.61e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,2.58e-74,4;UBERON:0010260,1.24e-33,9;UBERON:0005800,1.07e-17,2;UBERON:0001515,1.07e-17,2;UBERON:0001637,3.76e-13,42;UBERON:0003509,3.76e-13,42;UBERON:0004572,3.76e-13,42;UBERON:0007500,1.59e-09,59;UBERON:0001981,1.59e-09,59;UBERON:0004537,1.59e-09,59;UBERON:0006965,1.59e-09,59;UBERON:0000055,2.48e-08,68;UBERON:0002072,7.49e-08,5;UBERON:0002049,2.52e-07,78;UBERON:0007798,2.52e-07,78;UBERON:0004872,6.53e-07,83;UBERON:0003422,7.17e-07,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.61512706912,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0,0,0,0,0.154209693802656,1.06537035187876,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,8.11641507850816,2.478587984798,0.845086807596724,0,0.0982490410131212,9.27344733851251,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0.71153252537342,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0.184099797284599,0.161646056818812,0,0.10075209822764,0.847802961552438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.857839051492628,0,0,0,0,0,0,0,0,0.70445216541493,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.61512706912,0,0.845302752556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0.561320188866147,0,0,0,0,0.154209693802656,1.06537035187876,0.0821271560138091,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,8.11641507850816,2.478587984798,0.845086807596724,0,0.0982490410131212,9.27344733851251,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@FLT1 | |||
}} | }} |
Latest revision as of 00:14, 17 September 2015
Short description: | p5@FLT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FLT1_5end |
Coexpression cluster: | C3362_Mesenchymal_Smooth_mesenchymal_Mesothelial_Aortic_Endothelial_Preadipocyte |
Association with transcript: | 116bp_to_ENST00000543394, uc010aap.2_5end |
EntrezGene: | FLT1 |
HGNC: | 3763 |
UniProt: | B2BF48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 2.58e-74 | 4 |
mesenchymal stem cell of Wharton's jelly | 1.84e-34 | 1 |
thoracic aorta endothelial cell | 1.07e-17 | 2 |
subcutaneous preadipocyte | 1.27e-17 | 2 |
vascular associated smooth muscle cell | 4.57e-10 | 32 |
smooth muscle cell | 1.14e-07 | 43 |
smooth muscle myoblast | 1.14e-07 | 43 |
mesenchymal stem cell of umbilical cord | 7.17e-07 | 6 |
aortic endothelial cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 2.58e-74 | 4 |
umbilical blood vessel | 1.24e-33 | 9 |
segment of aorta | 1.07e-17 | 2 |
thoracic aorta | 1.07e-17 | 2 |
artery | 3.76e-13 | 42 |
arterial blood vessel | 3.76e-13 | 42 |
arterial system | 3.76e-13 | 42 |
epithelial tube open at both ends | 1.59e-09 | 59 |
blood vessel | 1.59e-09 | 59 |
blood vasculature | 1.59e-09 | 59 |
vascular cord | 1.59e-09 | 59 |
vessel | 2.48e-08 | 68 |
hypodermis | 7.49e-08 | 5 |
vasculature | 2.52e-07 | 78 |
vascular system | 2.52e-07 | 78 |
splanchnic layer of lateral plate mesoderm | 6.53e-07 | 83 |
mesenchyme of umbilical cord | 7.17e-07 | 6 |