FFCP PHASE1:Hg19::chr12:123465218..123465275,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51329 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18076 | |||
|TSSclassifier=strong | |||
|UniProt=F8WEP2 | |||
|association_with_transcript=0bp_to_ENST00000412505,ENST00000442210,ENST00000536502,ENST00000539576,ENST00000540708,uc001ueh.2_5end | |||
|cluster_id=chr12:123465218..123465275,+ | |||
|description=CAGE_peak_1_at_ARL6IP4_5end | |||
|id=chr12:123465218..123465275,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.47e-08!119;CL:0000220!9.62e-08!246;CL:0002078!1.22e-07!44;CL:0000071!1.32e-07!18;CL:0002546!1.32e-07!18;CL:0000066!2.66e-07!254;CL:0002321!3.11e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.34e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.74e-08,121;CL:0002078,6.38e-08,45;CL:0000071,1.32e-07,18;CL:0002546,1.32e-07,18;CL:0000066,1.72e-07,253;CL:0002321,3.20e-07,250;CL:0000115,6.80e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.34e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.43e-10!118;UBERON:0003104!5.34e-10!238;UBERON:0009142!5.34e-10!238;UBERON:0000055!6.08e-09!69;UBERON:0001981!6.88e-09!60;UBERON:0007500!6.88e-09!60;UBERON:0004537!6.88e-09!60;UBERON:0006965!6.88e-09!60;UBERON:0006914!2.48e-08!25;UBERON:0000487!9.50e-08!22;UBERON:0004872!1.10e-07!84;UBERON:0001986!1.32e-07!18;UBERON:0004638!1.32e-07!18;UBERON:0004852!1.32e-07!18;UBERON:0002049!3.91e-07!79;UBERON:0007798!3.91e-07!79;UBERON:0005256!4.78e-07!143;UBERON:0002100!5.50e-07!216;UBERON:0000490!5.93e-07!138;UBERON:0005177!9.63e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0006914;2.49e-08;25!UBERON:0000487;9.68e-08;22!UBERON:0004638;1.34e-07;18!UBERON:0001986;1.34e-07;18!UBERON:0004852;1.34e-07;18!UBERON:0003914;7.81e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.25e-11,117;UBERON:0000055,1.08e-08,68;UBERON:0007500,1.25e-08,59;UBERON:0001981,1.25e-08,59;UBERON:0004537,1.25e-08,59;UBERON:0006965,1.25e-08,59;UBERON:0006914,2.48e-08,25;UBERON:0000487,9.50e-08,22;UBERON:0004638,1.32e-07,18;UBERON:0001986,1.32e-07,18;UBERON:0004852,1.32e-07,18;UBERON:0002100,1.57e-07,199;UBERON:0000490,1.78e-07,148;UBERON:0004872,1.85e-07,83;UBERON:0005177,2.47e-07,101;UBERON:0007503,3.08e-07,78;UBERON:0002049,6.52e-07,78;UBERON:0007798,6.52e-07,78 | |||
|phase1_expression=71.0362462947876,102.768251467672,69.9133844316017,98.0718323860678,96.0966353018669,94.2125606028398,177.309914717817,140.873531774183,204.508346880474,159.727058725981,590.339788104674,154.874932840292,159.842788806443,125.004016489647,129.244976533887,121.01852636132,116.922738436652,126.343645637016,129.790124478275,129.400232038704,220.932748617526,174.907734584773,87.8744480492344,96.3595952513105,96.6678324879982,120.121873835779,123.315085353819,116.885510250814,124.303111484254,100.947131699567,143.669362437319,264.793312649931,332.531334331188,227.768470262741,111.552768835634,92.410001116824,133.88180033669,141.822824584161,144.993635520912,148.435435569643,89.3422742217298,73.1999685202894,94.7878088893807,96.3990323108514,111.473403388199,100.672385392944,94.1337599468023,101.558468341391,93.2216176394262,118.816958029048,111.17374663363,110.437201357969,88.599639949311,101.341095322661,106.98692440953,105.792194822944,93.3339033197833,94.6085869513806,94.273838850238,88.2554824459258,67.7697353346984,103.243456958442,111.300720952871,101.015265876249,95.7690487474327,103.831496118479,90.3092261043584,113.313148030791,119.941071236646,105.553778526687,92.6261239029054,89.8597431809658,77.8497473104576,169.637994908489,167.744792672419,152.421835284589,108.172471794075,114.885323023752,96.4353520182481,194.663703975273,196.7285937499,189.970719915219,131.997183345992,131.619405314174,113.857184494535,109.669667199592,120.118796110804,118.399002630624,138.819423284821,139.291848162163,92.2125009957307,71.0556999138836,69.9560007469169,64.7639510037227,94.1654385808981,131.428658302763,110.747600574088,126.156454842482,119.865673916714,94.4603698957331,138.516963319276,134.459176828664,138.326977169617,104.948650385834,109.593397580639,122.729777599326,88.0112557236301,125.657584650887,118.874243669729,135.825709202636,134.858808679494,89.2593504063962,104.097167339766,125.744189202165,107.671589519126,103.791357910971,127.61242436944,142.261762429809,94.1233254312551,124.559077000722,149.09811093312,135.914642356117,108.564660855074,100.085529922755,96.1966594453063,130.464265876253,155.193191418078,97.98087720722,110.452800858589,114.411279067411,70.7039912310489,162.30960804828,152.284311155645,130.118094858444,117.313071088798,151.943998389904,101.00131527549,145.017191350185,85.2704050819892,101.108605242929,114.536560543836,108.057737285613,333.694484075969,254.358127750119,108.723376874319,101.691766582772,118.997374664384,95.6347403464421,97.8111297434019,88.4068853164365,181.668840333168,196.133487684196,205.507176951696,188.247544660695,198.003733891076,161.76940866076,177.227731623215,86.0527808033865,86.4512018328706,74.3079760337568,162.340214794986,187.787210112473,200.374949247047,139.344307451084,197.674635283149,97.6046030144992,182.766909317702,181.417095058632,225.375457074848,173.715615700968,201.521918323448,30.3094960102945,38.7780264148325,239.415634626251,141.637006233166,100.291365238347,40.6496185096582,51.0569184932888,138.320669057359,147.458208837427,156.921023722666,183.520656022367,89.0063561243332,130.669351907597,116.548336919896,123.204946102974,84.6978608985598,194.955431285719,124.864030732128,161.443525497079,140.182862357589,124.598003061035,124.156548330357,125.56302119181,108.814173278858,130.327210667786,154.265391295418,136.620328587436,139.953081971663,223.899695036755,354.278743915406,105.041735107337,136.254068140569,84.5045552226758,150.130346341247,140.064922680152,147.684011905185,122.847054362303,38.3893820374165,112.544743907385,108.509133393696,56.4171260638676,108.308208229599,41.4801269473463,129.165098294123,47.4261493597958,98.8011232334554,39.1272350078377,104.936884452221,97.4725722617436,41.8911319169605,93.5986992534778,126.153080679003,99.7226002322612,99.8250801362455,102.676045149263,82.2102779313473,67.0600627706715,95.8600028673527,83.0325050673117,90.330864613475,70.0756529425594,123.595130540555,146.015692969785,157.473810341828,132.344859489114,129.216427218856,108.960562836696,107.051278199595,109.177996537217,110.624854650591,123.101885912209,119.584392031993,119.730201646226,119.498872261336,128.505550420094,181.586241837663,259.447281536375,176.565250861171,204.342108825903,130.557685866486,131.698847034802,140.607997790174,108.158459356589,57.6815776767203,116.151407572102,95.9217494471387,197.82708573341,148.280234307155,149.622927376184,267.162810354466,272.46291374325,98.1453125771858,111.177258371099,67.6274078798333,141.19038591033,169.45269760304,137.36349791338,112.999228908176,109.886228748144,106.119529623668,82.8375098592901,112.959683339433,144.350104339637,95.4138488169522,110.159250557334,140.965114734283,125.263227499518,176.739415095162,129.570431566633,128.990955829376,141.397774798807,131.437397516269,134.448191599095,117.217112863344,160.053150308918,153.554855845162,171.072446022705,107.763212353083,91.003946526707,107.470738669097,141.060904106464,137.327421682483,93.7263292791741,70.5823568037467,815.456696542292,142.856165181964,65.686714796463,96.7269163275705,175.672636621043,255.328437641901,192.090391070608,111.093901072381,176.352021752219,206.633324531973,120.522388188682,138.958251958335,148.886952111485,81.3886318060882,77.5664778154262,95.0743146141362,182.435670961786,135.107157595242,107.525309136346,107.112310404737,151.61775530103,430.76345322297,72.6802159471248,110.340785209556,96.8719811127835,150.530348383307,88.0727498102615,101.776215333692,111.145069418262,42.1797076209289,50.7545430044725,56.4500833327718,57.2905627443473,84.8458539698707,17.2271615507852,26.9245313283622,12.4324654030811,126.004161995557,168.557465597111,152.722208342951,174.487552824347,174.325122054827,169.687798576514,128.738415076992,154.686295260048,200.118603569267,251.439563240787,90.9989069993548,176.44129429441,98.0916007344655,206.570221123191,224.758942596111,97.1809722777571,114.112812233048,118.894499393037,161.566995580856,194.729464227282,252.798285223613,77.1615282316396,44.35051028025,117.596579567458,78.2930201952333,82.3848670997393,99.568577187893,93.5033818603443,101.778397909753,126.956633598886,90.8326345512729,87.753998532032,115.513116189199,62.8469137876436,74.3879004825187,163.075431405472,93.6885897023191,117.448803364332,119.060968783157,221.539009937539,115.291959645309,396.096633434312,292.278449306521,102.068425139411,282.058792495824,166.521737465709,95.6507508332477,427.209489952101,205.106453220697,267.400649464637,178.158514858482,239.349890571473,201.935028759405,82.0031938655795,85.2279570341176,116.171906677724,136.126077965378,100.867302345934,100.155863321586,67.9445428952108,47.1129244546557,142.992118961047,180.716748398153,104.444554398704,181.257596797729,131.711567633021,137.539292554612,128.050175838129,124.070382822856,133.270341707176,116.93093281489,105.32489817009,124.955396012899,167.013168540277,69.2937028845592,212.127866454088,135.27005484551,38.7219186601687,140.801528572441,112.124223184096,159.15950306479,157.457871565588,149.927293255071,218.408577168279,95.6447009254345,82.8914092763062,97.6026592889983,225.957749727908,90.2951264751572,150.828339516894,261.387897186344,103.426663110406,117.501848727031,109.565534181488,147.188846585374,261.542029935464,144.070392033732,253.569544326587,101.384811686614,172.209739213511,108.380929657941,121.184455184332,171.772337262769,118.543548862417,132.687795048244,124.958502297322,155.690618717739,139.049687433886,160.096287423573,199.836156274339,300.005816696837,100.53135789504,137.057412213304,160.858644218044,147.580602653369,149.041990520151,156.085779262993,186.700801492732,271.199408189862,184.554012207532,237.287005539669,266.78291291024,107.418076686305,196.310449938081,244.283639718057,248.764316134075,138.752933725004,66.9830844186464,74.9344462999528,84.3077837017761,72.4224597391679,72.8111223362564,60.9564912521154,66.4238667802881,76.9331421005442,101.482867571099,185.758612065828,181.574800041944,115.197968577946,84.5417588041967,119.447154981987,52.929522545969,100.188844459274,100.157308579228,99.9099310456727,93.8157407393465,76.3768324468608,123.931430715023,129.417593908517,225.57102938106,96.8348969025171,92.980495485042,117.649229292381,137.122488536285,122.287902733052,109.070471329503,94.8386697463843,88.5968942490234,113.520483428585,150.060927729536,299.102379442941,110.616372496677,172.864351390869,332.729332007325,122.764194507792,66.8077297479837,128.156710967486,79.0133594527322,179.00577248804,119.84973133832,125.319095311374,135.150708923662,75.5552212302386,81.3069226852764,77.3595499909196,120.801239808215,81.9166583536615,228.138946547475,102.777616577587,130.753096136369,60.6453287237778,121.238533379153,91.1345991849096,148.282779393089,107.054662456014,152.960138697835,105.055227003334,165.243333719388,146.700826990921,145.399911914283,92.6753300636894,73.8571052604418,188.289271264624,86.5853999962337,110.924935041523,185.59711415365,135.517195606044,120.084942338112,81.7041794582271,122.76554223435,106.779371883975,77.9452419516178,88.7589788283002,93.0748591534208,73.7563663741268,119.696785676187,129.876155115152,143.145141063953,75.9859406318388,89.1853496059008,76.5690615291848,114.359696576478,85.3595198336933,85.0708922149323,118.349430260542,107.352379466983,94.880190131317,121.610024852926,115.537468706738,198.124324824986,100.164473314028,107.638331340439,99.6860226636506,70.5883885733968,87.0972452812475,143.900680008114,150.663881930893,38.165329287164,88.7193422942574,155.260861248247,112.606479612751,187.586254494623,51.5946763904282,82.9114030331034,78.1076182300806,85.2624332205565,201.446989471996,106.356058359304,270.945361985264,169.641224614122,109.251170790342,105.748619963637,175.436538270563,47.441278052726,99.8979823926395,86.5862895827477,90.8308556639885,255.891740992266,125.114959320939,204.370329883104,261.64462120278,183.003938097157,99.7070898964467,103.441604047738,112.005310244634,78.3532859223623,85.4413407703527,115.574613820926,102.755223829008,108.976171775503,117.671449957249,102.614379444748,107.407706183556,107.340851870753,148.279362467784,186.79173500081,85.4695745404362,103.251130083976,57.4738741203497,109.928292290767,116.089383167218,92.7942286472443,81.8936662586297,32.0882646001874,39.7591242447293,266.148931181156,119.025487481482,129.924421006375,108.891563011139,92.5123833961439,61.835426238925,103.872709946794,90.4944554476074,160.960700964385,18.9096794224781,123.557056511278,115.064349324169,138.183735679045,90.4520010966786,158.545126396199,178.558036024813,152.426105432799,83.9793406084078,161.414347826997,392.591349907519,89.5764782833133,78.6247288956328,78.0533037831461,166.342443759925,156.052950997241,90.6561846382606,86.3529594747389,69.6061132853533,66.7066267496584,77.2719028734284,148.032820640887,152.438985047916,81.1006581384629,96.2697553409894,110.012767389681,88.3335264193368,143.722058002912,178.032327957515,166.390476075959,176.529745614222,154.929521065511,138.322084484184,97.1969287139146,83.829484646523,84.2595389082276,148.465437537484,122.482040958014,113.648810530876,113.652027794686,129.552174571425,159.008266694666,120.233149416242,99.7033817139883,173.139879938941,122.637813883101,98.3512069748468,48.1045173604978,118.058130773951,137.934154063722,152.556179825213,92.4405821711,68.3025145814095,136.004450842368,111.807692734124,102.932113792523,113.116057594883,163.807422388994,133.796295175015,123.002475021179,94.6443436141139,104.360473615593,83.9732920133972,84.7615900149884,105.560008456344,153.350960569505,103.576347280945,86.2105307305802,155.981238459888,104.907018900741,78.1124344212348,115.07545302578,134.852579781849,91.5429671479312,100.572995801072,97.105210076494,100.548668040409,104.808751325791,90.2848614866537,116.111588835337,96.5494129432309,83.1529124594527,102.105306461138,106.355125460238,98.7000774661236,96.7663840991101,96.001091373359,108.936766522983,76.5418476459279,63.0649636467226,102.017097812636,105.477167015724,96.0549882948482,89.17347906849,101.207024459778,148.690340344149,141.771534770452,133.75599212237,142.15343484059,117.085108890709,191.830804594431,179.777798931232,126.411270980813,133.136767251518,82.5599557385657,121.976571628584,180.470772803276,111.137472799959,117.677563345258,113.360377678212,90.4532560615452,110.192279012252,109.997304136212,90.0062419347767,103.860544611394,117.71824851764,149.335204955586,134.647647875876,101.74998422404,196.94289897024,145.590824182389,67.3224814370029,152.410256999822,213.953514494697,91.8688691756685,180.164805942644,118.194679406265,103.466546384654,100.492724221707,124.55462594987,141.098852544082,124.923142046163,117.341355896129,125.546929194369,303.344190459471,169.814323248926,43.4528214956906,100.871914283969,106.860810938277,91.5673977286069,84.0118264261691,126.109952929771,98.0151894610909,120.608422173564,45.3729053199093,136.308944606973,97.6927656072699,154.190973879887,174.21220033932,111.599358286962,135.186877110477,167.39669025184,163.231536859948,158.092423067763,81.7545672897889,100.706629659655,172.861243878917,226.639063257597,126.762840129008,107.925693639154,78.8072939536851,100.158237989079,119.504949087919,96.522733966053,98.8018322821068,43.7579847214576,203.951889270872,131.992173451552,91.1013045782835,170.43507847122,96.4263304580916,92.8143073323954,82.5473221761819,92.8861740713294,70.25227716881,136.897977216266,128.273031059189,84.0785596923408,117.864810224626,109.802078181206,154.055491620516,109.183892155065,77.4579858285889,89.9673644237263,167.108045853238,119.407957943898,99.3723510805064,115.291665756947,94.0180989809723,92.6444160183958,235.751817242298,254.94421398422,155.619339286441,156.719561972246,228.11568839865,172.951398245752,78.5724484850954,71.9201136167291,110.080633049642,52.4654728965875,143.005143791251,148.108535541502,114.763673024535,139.962233135336,133.134374080638,243.433242782648,135.001591015965,278.355463521168,132.113390112086,205.164909456267,54.1146108438922,75.7520978253112,189.862363907492,132.698203711733,94.351777229171,112.365574205167,187.086983791387,87.4790171232433,168.171748723179,163.79520023563,130.348822164324,65.9443008726131,74.3874080546784,184.200992321594,95.7696124214708,86.5669435485141,135.220383966429,134.45111577006,135.15873586711,125.497497501859,321.348010828468,120.18707225199,80.98686448057,145.14983721773,122.316690853456,75.0523187385449,106.863421784111,75.8869837060173,123.400892844589,126.75958270227,104.59196618828,95.0610476084151,137.341175096398,47.9347499787314,72.1486994217013,33.5416383302184,91.5082518417169,81.9167727739168,99.146728157786,115.25455208477,76.8507159253881,110.455202624708,129.268986284811,75.3752577786191,62.6954614388165,143.192388515443,96.7436805828107,139.056626003255,112.341841914832,202.602114242486,103.587457536436,100.626254165925,148.366519019522,99.1491811681669,93.5998823347565,318.569265773451,175.428619714164,143.130974866107,89.3584956976754,128.172296169458,116.507435482465,109.8954913007,150.026054397913 | |||
|short_description=p1@ARL6IP4 | |||
}} |
Latest revision as of 01:10, 17 September 2015
Short description: | p1@ARL6IP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARL6IP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000412505, ENST00000442210, ENST00000536502, ENST00000539576, ENST00000540708, uc001ueh.2_5end |
EntrezGene: | ARL6IP4 |
HGNC: | 18076 |
UniProt: | F8WEP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.74e-08 | 121 |
meso-epithelial cell | 6.38e-08 | 45 |
blood vessel endothelial cell | 1.32e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.32e-07 | 18 |
epithelial cell | 1.72e-07 | 253 |
embryonic cell | 3.20e-07 | 250 |
endothelial cell | 6.80e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.25e-11 | 117 |
vessel | 1.08e-08 | 68 |
epithelial tube open at both ends | 1.25e-08 | 59 |
blood vessel | 1.25e-08 | 59 |
blood vasculature | 1.25e-08 | 59 |
vascular cord | 1.25e-08 | 59 |
squamous epithelium | 2.48e-08 | 25 |
simple squamous epithelium | 9.50e-08 | 22 |
blood vessel endothelium | 1.32e-07 | 18 |
endothelium | 1.32e-07 | 18 |
cardiovascular system endothelium | 1.32e-07 | 18 |
trunk | 1.57e-07 | 199 |
unilaminar epithelium | 1.78e-07 | 148 |
splanchnic layer of lateral plate mesoderm | 1.85e-07 | 83 |
trunk region element | 2.47e-07 | 101 |
epithelial vesicle | 3.08e-07 | 78 |
vasculature | 6.52e-07 | 78 |
vascular system | 6.52e-07 | 78 |