FFCP PHASE1:Hg19::chr10:129691154..129691185,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:129691154..129691185,-
|short_description=p2@CLRN3
|description=CAGE_peak_2_at_CLRN3_5end
|association_with_transcript=25bp_to_ENST00000368671,NM_152311,u...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=119467 | |EntrezGene=119467 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20795 | |HGNC=20795 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCR9 | |UniProt=Q8NCR9 | ||
|association_with_transcript=25bp_to_ENST00000368671,NM_152311,uc001lka.1_5end | |||
|cluster_id=chr10:129691154..129691185,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_2_at_CLRN3_5end | |||
|id=chr10:129691154..129691185,- | |||
|ontology_enrichment_celltype=CL:0000181!3.77e-11!12;CL:0000417!3.77e-11!12;CL:0000668!3.77e-11!12;CL:0000414!3.77e-11!12;CL:0000412!3.77e-11!12;CL:0000182!3.77e-11!12;CL:0002178!5.85e-08!3;CL:0000223!2.27e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;6.33e-10;1!UBERON:0006242;6.33e-10;1!UBERON:0004161;1.43e-07;11!UBERON:0003104;8.09e-07;31 | |||
|ontology_enrichment_disease=DOID:3493!9.06e-12!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.53e-23!35;UBERON:0000160!2.51e-22!27;UBERON:0000059!6.52e-18!11;UBERON:0004921!4.54e-14!129;UBERON:0004185!4.54e-14!129;UBERON:0001007!2.72e-12!155;UBERON:0001555!2.72e-12!155;UBERON:0007026!2.72e-12!155;UBERON:0004119!4.21e-12!169;UBERON:0000925!4.21e-12!169;UBERON:0006595!4.21e-12!169;UBERON:0009854!8.96e-11!23;UBERON:0001155!2.03e-10!9;UBERON:0004907!2.10e-10!5;UBERON:0009497!7.58e-10!25;UBERON:0000015!7.58e-10!25;UBERON:0002423!7.58e-10!25;UBERON:0006235!7.58e-10!25;UBERON:0004161!7.58e-10!25;UBERON:0002107!8.65e-10!19;UBERON:0006925!8.65e-10!19;UBERON:0008836!8.65e-10!19;UBERON:0009856!1.99e-09!26;UBERON:0008835!2.24e-08!22;UBERON:0003894!2.24e-08!22;UBERON:0005172!4.38e-08!55;UBERON:0005173!4.38e-08!55;UBERON:0007499!2.66e-07!25;UBERON:0000077!3.32e-07!130;UBERON:0002417!4.04e-07!61;UBERON:0000916!4.04e-07!61;UBERON:0005057!5.36e-07!26;UBERON:0001154!6.24e-07!1;UBERON:0001153!6.24e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.09e-38;17!UBERON:0005409;8.44e-30;22!UBERON:0000059;6.56e-20;11!UBERON:0004921;3.33e-17;33!UBERON:0002108;7.30e-17;4!UBERON:0001155;5.15e-16;9!UBERON:0001154;6.33e-10;1!UBERON:0001153;6.33e-10;1!UBERON:0009854;6.33e-10;1!UBERON:0001007;1.30e-08;81!UBERON:0004907;8.61e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.19e-38,17;UBERON:0005409,3.29e-26,25;UBERON:0000059,7.10e-20,11;UBERON:0002108,6.92e-17,4;UBERON:0001155,4.77e-16,9;UBERON:0004921,3.32e-10,118;UBERON:0001154,5.30e-10,1;UBERON:0001153,5.30e-10,1;UBERON:0001045,5.30e-10,1;UBERON:0001007,2.53e-09,145;UBERON:0001555,2.53e-09,145;UBERON:0007026,2.53e-09,145;UBERON:0004119,3.14e-08,160;UBERON:0000925,3.14e-08,160;UBERON:0006595,3.14e-08,160;UBERON:0004907,9.23e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,0.590789906681404,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23993513143015,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76283915531148,6.2983186963569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,16.8953948201378,5.49927130440263,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,4.09789677955831,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,2.24217730651031,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98150233615243,1.82876887473404,0,0,0,0,0,0,0,0,0,0,41.2881745877504,20.326039126868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,2.69475606319761,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,0.982827216677626,0.590789906681404,0,2.58275720940538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95403963262472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23993513143015,0,0,0,0,0,0,0,0,0,0,0,0,0,2.76283915531148,6.2983186963569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.95261931078505,16.8953948201378,5.49927130440263,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,2.77488893161158,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,0,0,0,0.590564889088493,0,0,0,0,0,0,0,0,0,0,4.09789677955831,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,2.24217730651031,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98150233615243,1.82876887473404,0,0,0,0,0,0,0,0,0,0,41.2881745877504,20.326039126868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.81929524566941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0,0,0,0,2.69475606319761,0,0,0,0,0,0 | ||
|short_description=p2@CLRN3 | |||
}} | }} |
Latest revision as of 01:20, 17 September 2015
Short description: | p2@CLRN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLRN3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 25bp_to_ENST00000368671, NM_152311, uc001lka.1_5end |
EntrezGene: | CLRN3 |
HGNC: | 20795 |
UniProt: | Q8NCR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.19e-38 | 17 |
gastrointestinal system | 3.29e-26 | 25 |
large intestine | 7.10e-20 | 11 |
small intestine | 6.92e-17 | 4 |
colon | 4.77e-16 | 9 |
subdivision of digestive tract | 3.32e-10 | 118 |
vermiform appendix | 5.30e-10 | 1 |
caecum | 5.30e-10 | 1 |
midgut | 5.30e-10 | 1 |
digestive system | 2.53e-09 | 145 |
digestive tract | 2.53e-09 | 145 |
primitive gut | 2.53e-09 | 145 |
endoderm-derived structure | 3.14e-08 | 160 |
endoderm | 3.14e-08 | 160 |
presumptive endoderm | 3.14e-08 | 160 |
lower digestive tract | 9.23e-08 | 5 |