FFCP PHASE1:Hg19::chr15:29211600..29211611,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=321 | |EntrezGene=321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=579 | |HGNC=579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_ENST00000558804_5end | |||
|cluster_id=chr15:29211600..29211611,+ | |||
|description=CAGE_peak_14_at_APBA2_5end | |||
|id=chr15:29211600..29211611,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.20e-30!18;CL:0000789!1.20e-30!18;CL:0002420!1.20e-30!18;CL:0002419!1.20e-30!18;CL:0000790!1.20e-30!18;CL:0000084!7.91e-24!25;CL:0000827!7.91e-24!25;CL:0000625!1.30e-23!11;CL:0000838!1.16e-13!52;CL:0000542!2.63e-13!53;CL:0000051!2.63e-13!53;CL:0000842!7.17e-09!3;CL:0000623!1.06e-08!3;CL:0000825!1.06e-08!3;CL:0002087!3.33e-07!119;CL:0000624!5.52e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000625;6.91e-40;11!CL:0000791;9.03e-40;18!CL:0000789;9.03e-40;18!CL:0002419;9.03e-40;18!CL:0000084;2.57e-28;25!CL:0000226;6.16e-13;3!CL:0000842;6.16e-13;3!CL:0002127;8.94e-11;1!CL:0000911;8.94e-11;1!CL:0000814;8.94e-11;1!CL:0000542;9.33e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.19e-40,11;CL:0000791,6.31e-40,18;CL:0000789,6.31e-40,18;CL:0002420,6.31e-40,18;CL:0002419,6.31e-40,18;CL:0000790,6.31e-40,18;CL:0000084,1.99e-28,25;CL:0000827,1.99e-28,25;CL:0000838,4.40e-16,52;CL:0000542,9.45e-16,53;CL:0000051,9.45e-16,53;CL:0000226,3.57e-13,3;CL:0000842,3.57e-13,3;CL:0002127,9.84e-11,1;CL:0000914,9.84e-11,1;CL:0000911,9.84e-11,1;CL:0000814,9.84e-11,1;CL:0002042,9.84e-11,1;CL:0002039,9.84e-11,1;CL:0002040,9.84e-11,1;CL:0002041,9.84e-11,1;CL:0002087,2.14e-09,115;CL:0000037,3.09e-08,168;CL:0000988,1.06e-07,177;CL:0000738,1.18e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;9.03e-40;18!CL:0000051;9.33e-08;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.24e-13!15;UBERON:0000179!2.24e-13!15;UBERON:0000463!2.24e-13!15;UBERON:0007023!8.04e-13!115;UBERON:0003135!2.83e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.03e-21;15!UBERON:0000179;2.03e-21;15!UBERON:0000463;2.03e-21;15!UBERON:0002390;4.79e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.19e-21,15;UBERON:0000179,1.19e-21,15;UBERON:0000463,1.19e-21,15 | |||
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| ||
|short_description=p14@APBA2 | |||
}} | }} |
Latest revision as of 02:20, 17 September 2015
Short description: | p14@APBA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_APBA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_ENST00000558804_5end |
EntrezGene: | APBA2 |
HGNC: | 579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 6.19e-40 | 11 |
mature alpha-beta T cell | 6.31e-40 | 18 |
alpha-beta T cell | 6.31e-40 | 18 |
immature T cell | 6.31e-40 | 18 |
mature T cell | 6.31e-40 | 18 |
immature alpha-beta T cell | 6.31e-40 | 18 |
T cell | 1.99e-28 | 25 |
pro-T cell | 1.99e-28 | 25 |
lymphoid lineage restricted progenitor cell | 4.40e-16 | 52 |
lymphocyte | 9.45e-16 | 53 |
common lymphoid progenitor | 9.45e-16 | 53 |
single nucleate cell | 3.57e-13 | 3 |
mononuclear cell | 3.57e-13 | 3 |
innate effector T cell | 9.84e-11 | 1 |
immature NK T cell | 9.84e-11 | 1 |
effector T cell | 9.84e-11 | 1 |
mature NK T cell | 9.84e-11 | 1 |
immature NK T cell stage IV | 9.84e-11 | 1 |
immature NK T cell stage I | 9.84e-11 | 1 |
immature NK T cell stage II | 9.84e-11 | 1 |
immature NK T cell stage III | 9.84e-11 | 1 |
nongranular leukocyte | 2.14e-09 | 115 |
hematopoietic stem cell | 3.09e-08 | 168 |
hematopoietic cell | 1.06e-07 | 177 |
leukocyte | 1.18e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 1.19e-21 | 15 |
haemolymphatic fluid | 1.19e-21 | 15 |
organism substance | 1.19e-21 | 15 |