FFCP PHASE1:Hg19::chr20:52824367..52824409,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:52824367..52824409,+ to FFCP PHASE1:Hg19::chr20:52824367..52824409,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5203 | |EntrezGene=5203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8868 | |HGNC=8868 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQP4 | |UniProt=Q9NQP4 | ||
|association_with_transcript=0bp_to_ENST00000371419_5end | |||
|cluster_id=chr20:52824367..52824409,+ | |||
|description=CAGE_peak_3_at_PFDN4_5end | |||
|id=chr20:52824367..52824409,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.00e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.08e-08,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.58e-22!239;DOID:162!1.72e-22!235;DOID:0050687!6.79e-18!143;DOID:305!1.25e-14!106;DOID:0050686!1.50e-10!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.40e-19,235;DOID:0050687,4.99e-19,143;DOID:14566,7.58e-19,239;DOID:305,4.50e-18,106;DOID:0050686,9.37e-09,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@PFDN4 | |||
}} | }} |
Latest revision as of 02:35, 17 September 2015
Short description: | p3@PFDN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PFDN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000371419_5end |
EntrezGene: | PFDN4 |
HGNC: | 8868 |
UniProt: | Q9NQP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.08e-08 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.40e-19 | 235 |
cell type cancer | 4.99e-19 | 143 |
disease of cellular proliferation | 7.58e-19 | 239 |
carcinoma | 4.50e-18 | 106 |
organ system cancer | 9.37e-09 | 137 |