FFCP PHASE1:Hg19::chr20:52824611..52824642,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5203 | |EntrezGene=5203 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8868 | |HGNC=8868 | ||
|TSSclassifier=strong | |||
|UniProt=E9PQY2 | |UniProt=E9PQY2 | ||
|association_with_transcript=0bp_to_ENST00000441080_5end | |association_with_transcript=0bp_to_ENST00000441080_5end | ||
|cluster_id=chr20:52824611..52824642,+ | |||
|description=CAGE_peak_1_at_PFDN4_5end | |description=CAGE_peak_1_at_PFDN4_5end | ||
|id=chr20:52824611..52824642,+ | |id=chr20:52824611..52824642,+ | ||
|ontology_enrichment_celltype=CL:0000066!2.96e-11!254;CL:0000012!1.62e-08!682;CL:0000548!4.76e-08!679;CL:0000004!4.76e-08!679;CL:0000255!4.76e-08!679 | |ontology_enrichment_celltype=CL:0000066!2.96e-11!254;CL:0000012!1.62e-08!682;CL:0000548!4.76e-08!679;CL:0000004!4.76e-08!679;CL:0000255!4.76e-08!679 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.26e-11,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.22e-38!235;DOID:14566!3.01e-38!239;DOID:0050687!3.23e-32!143;DOID:305!1.23e-24!106;DOID:0050686!6.92e-17!137;DOID:7!8.50e-09!39;DOID:3095!2.18e-08!22;DOID:2994!2.18e-08!22;DOID:299!1.40e-07!25 | |ontology_enrichment_disease=DOID:162!2.22e-38!235;DOID:14566!3.01e-38!239;DOID:0050687!3.23e-32!143;DOID:305!1.23e-24!106;DOID:0050686!6.92e-17!137;DOID:7!8.50e-09!39;DOID:3095!2.18e-08!22;DOID:2994!2.18e-08!22;DOID:299!1.40e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.04e-08;22!DOID:2994;2.04e-08;22!DOID:299;1.46e-07;25!DOID:7;1.55e-07;39!DOID:0050687;2.00e-07;143!DOID:305;2.38e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.22e-38,235;DOID:14566,3.01e-38,239;DOID:0050687,3.23e-32,143;DOID:305,1.23e-24,106;DOID:0050686,6.92e-17,137;DOID:7,8.50e-09,39;DOID:3095,2.18e-08,22;DOID:2994,2.18e-08,22;DOID:299,1.40e-07,25 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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6332 | ||
|short_description=p1@PFDN4 | |short_description=p1@PFDN4 | ||
}} | }} |
Latest revision as of 02:38, 17 September 2015
Short description: | p1@PFDN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PFDN4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000441080_5end |
EntrezGene: | PFDN4 |
HGNC: | 8868 |
UniProt: | E9PQY2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.26e-11 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.22e-38 | 235 |
disease of cellular proliferation | 3.01e-38 | 239 |
cell type cancer | 3.23e-32 | 143 |
carcinoma | 1.23e-24 | 106 |
organ system cancer | 6.92e-17 | 137 |
disease of anatomical entity | 8.50e-09 | 39 |
germ cell and embryonal cancer | 2.18e-08 | 22 |
germ cell cancer | 2.18e-08 | 22 |
adenocarcinoma | 1.40e-07 | 25 |