FFCP PHASE1:Hg19::chr11:1856354..1856364,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90019 | |EntrezGene=90019 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |HGNC=19264 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=18bp_to_ENST00000482118_5end | |association_with_transcript=18bp_to_ENST00000482118_5end | ||
|cluster_id=chr11:1856354..1856364,+ | |||
|coexpression_cluster_id=C1138 | |||
|description=CAGE_peak_11_at_SYT8_5end | |description=CAGE_peak_11_at_SYT8_5end | ||
|id=chr11:1856354..1856364,+ | |id=chr11:1856354..1856364,+ | ||
|ontology_enrichment_celltype=CL:0002327!6.37e-17!4;CL:0002541!1.70e-10!3;CL:0002623!1.87e-10!3;CL:0002076!3.77e-09!43 | |ontology_enrichment_celltype=CL:0002327!6.37e-17!4;CL:0002541!1.70e-10!3;CL:0002623!1.87e-10!3;CL:0002076!3.77e-09!43 | ||
|ontology_enrichment_celltype_v019=CL:0002623;4.09e-23;3!CL:0002327;7.35e-18;4!CL:0000622;1.83e-14;5!CL:0000154;2.74e-12;6!CL:0000150;1.21e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,4.09e-23,3;CL:0002327,7.35e-18,4;CL:0000622,1.83e-14,5;CL:0000154,2.74e-12,6;CL:0000150,1.21e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006242;2.39e-66;1!UBERON:0004161;2.47e-07;11 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001044!2.47e-19!6;UBERON:0003293!2.47e-19!6;UBERON:0003294!2.47e-19!6;UBERON:0010047!2.47e-19!6;UBERON:0000167!2.47e-19!6;UBERON:0001911!6.37e-17!4;UBERON:0005333!6.37e-17!4;UBERON:0008425!6.37e-17!4;UBERON:0005311!6.37e-17!4;UBERON:0000166!1.28e-15!21;UBERON:0000078!1.31e-13!18;UBERON:0000161!1.04e-11!35;UBERON:0003408!1.14e-11!10;UBERON:0000165!1.66e-11!28;UBERON:0000930!1.66e-11!28;UBERON:0002365!1.55e-10!31;UBERON:0002330!1.55e-10!31;UBERON:0000476!1.70e-10!3;UBERON:0000920!1.70e-10!3;UBERON:0000076!1.04e-08!8;UBERON:0001736!1.52e-08!1;UBERON:0006298!1.52e-08!1;UBERON:0001301!4.11e-08!1;UBERON:0001004!5.61e-08!72;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0004119!2.58e-07!169;UBERON:0000925!2.58e-07!169;UBERON:0006595!2.58e-07!169 | |ontology_enrichment_uberon=UBERON:0001044!2.47e-19!6;UBERON:0003293!2.47e-19!6;UBERON:0003294!2.47e-19!6;UBERON:0010047!2.47e-19!6;UBERON:0000167!2.47e-19!6;UBERON:0001911!6.37e-17!4;UBERON:0005333!6.37e-17!4;UBERON:0008425!6.37e-17!4;UBERON:0005311!6.37e-17!4;UBERON:0000166!1.28e-15!21;UBERON:0000078!1.31e-13!18;UBERON:0000161!1.04e-11!35;UBERON:0003408!1.14e-11!10;UBERON:0000165!1.66e-11!28;UBERON:0000930!1.66e-11!28;UBERON:0002365!1.55e-10!31;UBERON:0002330!1.55e-10!31;UBERON:0000476!1.70e-10!3;UBERON:0000920!1.70e-10!3;UBERON:0000076!1.04e-08!8;UBERON:0001736!1.52e-08!1;UBERON:0006298!1.52e-08!1;UBERON:0001301!4.11e-08!1;UBERON:0001004!5.61e-08!72;UBERON:0002372!7.16e-08!1;UBERON:0001961!7.16e-08!1;UBERON:0001744!7.16e-08!1;UBERON:0001735!7.16e-08!1;UBERON:0004119!2.58e-07!169;UBERON:0000925!2.58e-07!169;UBERON:0006595!2.58e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002110;3.27e-23;3!UBERON:0001911;7.35e-18;4!UBERON:0001044;2.74e-12;6!UBERON:0003293;2.74e-12;6!UBERON:0003294;2.74e-12;6!UBERON:0010047;2.74e-12;6!UBERON:0003408;2.74e-12;6!UBERON:0000167;2.74e-12;6!UBERON:0002294;8.99e-11;7!UBERON:0001173;8.99e-11;7!UBERON:0002365;2.80e-09;31!UBERON:0002330;2.80e-09;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,3.27e-23,3;UBERON:0006242,3.27e-23,3;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0001044,2.74e-12,6;UBERON:0003293,2.74e-12,6;UBERON:0003294,2.74e-12,6;UBERON:0010047,2.74e-12,6;UBERON:0000167,2.74e-12,6;UBERON:0002365,1.20e-09,31;UBERON:0002330,1.20e-09,31;UBERON:0000076,1.24e-09,8;UBERON:0002294,1.12e-08,9;UBERON:0001173,1.12e-08,9;UBERON:0004912,1.12e-08,9;UBERON:0003408,6.56e-08,10 | |||
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|short_description=p11@SYT8 | |short_description=p11@SYT8 | ||
}} | }} |
Latest revision as of 03:04, 17 September 2015
Short description: | p11@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SYT8_5end |
Coexpression cluster: | C1138_Mammary_salivary_glassy_gall_Small_oral_throat |
Association with transcript: | 18bp_to_ENST00000482118_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 4.09e-23 | 3 |
mammary gland epithelial cell | 7.35e-18 | 4 |
acinar cell | 1.83e-14 | 5 |
protein secreting cell | 2.74e-12 | 6 |
glandular epithelial cell | 1.21e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gallbladder | 3.27e-23 | 3 |
gall bladder primordium | 3.27e-23 | 3 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
saliva-secreting gland | 2.74e-12 | 6 |
gland of oral region | 2.74e-12 | 6 |
gland of foregut | 2.74e-12 | 6 |
oral gland | 2.74e-12 | 6 |
oral cavity | 2.74e-12 | 6 |
exocrine gland | 1.20e-09 | 31 |
exocrine system | 1.20e-09 | 31 |
external ectoderm | 1.24e-09 | 8 |
biliary system | 1.12e-08 | 9 |
biliary tree | 1.12e-08 | 9 |
biliary bud | 1.12e-08 | 9 |
gland of gut | 6.56e-08 | 10 |