FFCP PHASE1:Hg19::chr2:136875437..136875441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7852 | |EntrezGene=7852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2561 | |HGNC=2561 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-130bp_to_ENST00000466288,uc010fnk.2_5end | |association_with_transcript=-130bp_to_ENST00000466288,uc010fnk.2_5end | ||
|cluster_id=chr2:136875437..136875441,- | |||
|coexpression_cluster_id=C13 | |coexpression_cluster_id=C13 | ||
|description=CAGE_peak_6_at_CXCR4_5end | |description=CAGE_peak_6_at_CXCR4_5end | ||
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|ontology_enrichment_development_v019=CL:0000790;2.44e-21;18!CL:0000051;2.47e-13;53 | |ontology_enrichment_development_v019=CL:0000790;2.44e-21;18!CL:0000051;2.47e-13;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.65e-24!102;UBERON:0003061!4.65e-24!102;UBERON:0002193!8.23e-23!112;UBERON:0000178!2.23e-14!15;UBERON:0000179!2.23e-14!15;UBERON:0000463!2.23e-14!15;UBERON:0002371!1.04e-10!80;UBERON:0002405!1.03e-09!115;UBERON:0001474!2.27e-09!86;UBERON:0002384!3.80e-08!375;UBERON:0004765!8.55e-07!101;UBERON:0001434!8.55e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!4.65e-24!102;UBERON:0003061!4.65e-24!102;UBERON:0002193!8.23e-23!112;UBERON:0000178!2.23e-14!15;UBERON:0000179!2.23e-14!15;UBERON:0000463!2.23e-14!15;UBERON:0002371!1.04e-10!80;UBERON:0002405!1.03e-09!115;UBERON:0001474!2.27e-09!86;UBERON:0002384!3.80e-08!375;UBERON:0004765!8.55e-07!101;UBERON:0001434!8.55e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.51e-26;15!UBERON:0000179;1.51e-26;15!UBERON:0000463;1.51e-26;15!UBERON:0002390;2.48e-11;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.51e-26;15!UBERON:0000179;1.51e-26;15!UBERON:0000463;1.51e-26;15!UBERON:0002390;2.48e-11;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.11e-26,15;UBERON:0000179,2.11e-26,15;UBERON:0000463,2.11e-26,15;UBERON:0002390,2.93e-09,98;UBERON:0003061,2.93e-09,98;UBERON:0002193,4.76e-08,108 | |||
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|short_description=p6@CXCR4 | |short_description=p6@CXCR4 | ||
}} | }} |
Latest revision as of 03:08, 17 September 2015
Short description: | p6@CXCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CXCR4_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | -130bp_to_ENST00000466288, uc010fnk.2_5end |
EntrezGene: | CXCR4 |
HGNC: | 2561 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 9.64e-26 | 136 |
CD4-positive, alpha-beta T cell | 1.08e-24 | 6 |
lymphoid lineage restricted progenitor cell | 1.23e-21 | 52 |
mature alpha-beta T cell | 1.47e-21 | 18 |
alpha-beta T cell | 1.47e-21 | 18 |
immature T cell | 1.47e-21 | 18 |
mature T cell | 1.47e-21 | 18 |
immature alpha-beta T cell | 1.47e-21 | 18 |
nongranular leukocyte | 2.95e-21 | 115 |
lymphocyte | 3.80e-21 | 53 |
common lymphoid progenitor | 3.80e-21 | 53 |
hematopoietic stem cell | 2.10e-19 | 168 |
hematopoietic cell | 4.92e-18 | 177 |
hematopoietic oligopotent progenitor cell | 3.96e-16 | 161 |
hematopoietic multipotent progenitor cell | 3.96e-16 | 161 |
hematopoietic lineage restricted progenitor cell | 3.34e-15 | 120 |
T cell | 5.76e-15 | 25 |
pro-T cell | 5.76e-15 | 25 |
neutrophil | 2.20e-14 | 3 |
granulocyte | 4.11e-14 | 8 |
single nucleate cell | 8.76e-14 | 3 |
mononuclear cell | 8.76e-14 | 3 |
natural killer cell | 9.55e-14 | 3 |
pro-NK cell | 9.55e-14 | 3 |
naive T cell | 5.80e-13 | 3 |
blood cell | 3.66e-10 | 11 |
eosinophil | 3.83e-10 | 2 |
regulatory T cell | 3.25e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.25e-09 | 2 |
naive regulatory T cell | 3.25e-09 | 2 |
B cell | 6.36e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
blood | 2.11e-26 | 15 |
haemolymphatic fluid | 2.11e-26 | 15 |
organism substance | 2.11e-26 | 15 |
hematopoietic system | 2.93e-09 | 98 |
blood island | 2.93e-09 | 98 |
hemolymphoid system | 4.76e-08 | 108 |