FFCP PHASE1:Hg19::chr4:186456789..186456794,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27295 | |EntrezGene=27295 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20767 | |HGNC=20767 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-23bp_to_ENST00000284771_5end | |association_with_transcript=-23bp_to_ENST00000284771_5end | ||
|cluster_id=chr4:186456789..186456794,- | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_4_at_PDLIM3_5end | |description=CAGE_peak_4_at_PDLIM3_5end | ||
|id=chr4:186456789..186456794,- | |id=chr4:186456789..186456794,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002569;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004874;5.97e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!8.77e-07!2;UBERON:0005090!8.77e-07!2 | |ontology_enrichment_uberon=UBERON:0001630!8.77e-07!2;UBERON:0005090!8.77e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000989;5.97e-34;1!UBERON:0008811;5.97e-34;1!UBERON:0000341;9.86e-18;2!UBERON:0001723;2.74e-12;3!UBERON:0001033;2.74e-12;3!UBERON:0001134;2.45e-09;16!UBERON:0002036;2.45e-09;16!UBERON:0000974;8.72e-07;6!UBERON:0003422;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.61e-34,1;UBERON:0008811,3.61e-34,1;UBERON:0006258,3.61e-34,1;UBERON:0005876,3.61e-34,1;UBERON:0004874,3.61e-34,1;UBERON:0000341,1.27e-17,2;UBERON:0001723,2.59e-12,3;UBERON:0001033,2.59e-12,3;UBERON:0010056,2.59e-12,3;UBERON:0003422,8.97e-07,6 | |||
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| ||
|short_description=p4@PDLIM3 | |short_description=p4@PDLIM3 | ||
}} | }} |
Latest revision as of 03:40, 17 September 2015
Short description: | p4@PDLIM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDLIM3_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -23bp_to_ENST00000284771_5end |
EntrezGene: | PDLIM3 |
HGNC: | 20767 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
penis | 3.61e-34 | 1 |
intromittent organ | 3.61e-34 | 1 |
lateral plate mesenchyme | 3.61e-34 | 1 |
undifferentiated genital tubercle | 3.61e-34 | 1 |
somatopleure | 3.61e-34 | 1 |
throat | 1.27e-17 | 2 |
tongue | 2.59e-12 | 3 |
gustatory system | 2.59e-12 | 3 |
future tongue | 2.59e-12 | 3 |
mesenchyme of umbilical cord | 8.97e-07 | 6 |