FFCP PHASE1:Hg19::chr6:21597499..21597513,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:21597499..21597513,+ to FFCP PHASE1:Hg19::chr6:21597499..21597513,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6659 | |EntrezGene=6659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11200 | |HGNC=11200 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-147bp_to_AJ420500_5end | |||
|cluster_id=chr6:21597499..21597513,+ | |||
|coexpression_cluster_id=C1086 | |||
|description=CAGE_peak_16_at_SOX4_5end | |||
|id=chr6:21597499..21597513,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.06e-11!254 | |||
|ontology_enrichment_celltype_v019=CL:0000540;1.51e-18;6!CL:0000404;1.51e-18;6!CL:0002322;7.17e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.48e-18,6;CL:0000031,1.48e-18,6;CL:0000404,1.48e-18,6;CL:0000047,7.75e-14,8;CL:0002322,6.79e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.51e-18;6 | |||
|ontology_enrichment_disease=DOID:162!1.29e-11!235;DOID:14566!1.18e-10!239;DOID:0050687!4.52e-09!143;DOID:305!7.22e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.34e-07;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p16@SOX4 | |||
}} | }} |
Latest revision as of 03:55, 17 September 2015
Short description: | p16@SOX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SOX4_5end |
Coexpression cluster: | C1086_occipital_parietal_temporal_duodenum_small_Neurons_transitionalcell |
Association with transcript: | -147bp_to_AJ420500_5end |
EntrezGene: | SOX4 |
HGNC: | 11200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.48e-18 | 6 |
neuroblast | 1.48e-18 | 6 |
electrically signaling cell | 1.48e-18 | 6 |
neuronal stem cell | 7.75e-14 | 8 |
embryonic stem cell | 6.79e-08 | 5 |