FFCP PHASE1:Hg19::chr1:26232453..26232521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3925 | |EntrezGene=3925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6510 | |HGNC=6510 | ||
|TSSclassifier=strong | |||
|UniProt=P16949 | |UniProt=P16949 | ||
|association_with_transcript=122bp_to_ENST00000399728,NM_203401,uc001bkz.2_5end | |association_with_transcript=122bp_to_ENST00000399728,NM_203401,uc001bkz.2_5end | ||
|cluster_id=chr1:26232453..26232521,- | |||
|description=CAGE_peak_6_at_STMN1_5end | |description=CAGE_peak_6_at_STMN1_5end | ||
|id=chr1:26232453..26232521,- | |id=chr1:26232453..26232521,- | ||
|ontology_enrichment_celltype=CL:0000066!7.69e-15!254;CL:0002319!2.76e-11!25;CL:0002321!4.47e-11!248;CL:0000220!2.24e-10!246;CL:0002139!1.15e-08!24;CL:0000071!6.21e-08!18;CL:0002546!6.21e-08!18;CL:0000133!1.13e-07!59;CL:0000076!1.48e-07!62;CL:0000095!6.93e-07!17;CL:0000123!6.93e-07!17 | |ontology_enrichment_celltype=CL:0000066!7.69e-15!254;CL:0002319!2.76e-11!25;CL:0002321!4.47e-11!248;CL:0000220!2.24e-10!246;CL:0002139!1.15e-08!24;CL:0000071!6.21e-08!18;CL:0002546!6.21e-08!18;CL:0000133!1.13e-07!59;CL:0000076!1.48e-07!62;CL:0000095!6.93e-07!17;CL:0000123!6.93e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.33e-20;25!CL:0000095;2.37e-12;17!CL:0000128;6.72e-12;7!CL:0000126;6.72e-12;7!CL:0000127;6.72e-12;7!CL:0002322;7.70e-10;5!CL:0000243;1.32e-09;15!CL:0000125;1.32e-09;15!CL:0002139;1.43e-09;24!CL:0000071;2.45e-08;18!CL:0000540;4.05e-07;6!CL:0000404;4.05e-07;6!CL:0002605;9.62e-07;3 | |ontology_enrichment_celltype_v019=CL:0002319;3.33e-20;25!CL:0000095;2.37e-12;17!CL:0000128;6.72e-12;7!CL:0000126;6.72e-12;7!CL:0000127;6.72e-12;7!CL:0002322;7.70e-10;5!CL:0000243;1.32e-09;15!CL:0000125;1.32e-09;15!CL:0002139;1.43e-09;24!CL:0000071;2.45e-08;18!CL:0000540;4.05e-07;6!CL:0000404;4.05e-07;6!CL:0002605;9.62e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.65e-20,25;CL:0000133,4.70e-14,59;CL:0002321,1.08e-13,250;CL:0000066,7.89e-13,253;CL:0000095,5.00e-12,17;CL:0000123,5.00e-12,17;CL:0000128,1.24e-11,7;CL:0000126,1.24e-11,7;CL:0000127,1.24e-11,7;CL:0002453,1.24e-11,7;CL:0000221,4.92e-11,72;CL:0000047,3.79e-10,8;CL:0002139,7.18e-10,24;CL:0002322,9.12e-10,5;CL:0000243,2.51e-09,15;CL:0000125,2.51e-09,15;CL:0000030,2.51e-09,15;CL:0000339,2.51e-09,15;CL:0000071,1.21e-08,18;CL:0002546,1.21e-08,18;CL:0000333,4.55e-08,41;CL:0000115,2.57e-07,36;CL:0000540,2.73e-07,6;CL:0000031,2.73e-07,6;CL:0000404,2.73e-07,6;CL:0002605,9.60e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000339;1.32e-09;15!CL:0002546;2.45e-08;18!CL:0000133;1.15e-07;59!CL:0000031;4.05e-07;6 | |ontology_enrichment_development_v019=CL:0000339;1.32e-09;15!CL:0002546;2.45e-08;18!CL:0000133;1.15e-07;59!CL:0000031;4.05e-07;6 | ||
|ontology_enrichment_disease=DOID:162!1.03e-15!235;DOID:14566!1.86e-15!239;DOID:305!1.06e-12!106;DOID:0050687!1.47e-11!143;DOID:0050686!2.11e-08!137 | |ontology_enrichment_disease=DOID:162!1.03e-15!235;DOID:14566!1.86e-15!239;DOID:305!1.06e-12!106;DOID:0050687!1.47e-11!143;DOID:0050686!2.11e-08!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.91e-10,106;DOID:0050687,1.76e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001986!6.21e-08!18;UBERON:0004638!6.21e-08!18;UBERON:0004852!6.21e-08!18 | |ontology_enrichment_uberon=UBERON:0001986!6.21e-08!18;UBERON:0004638!6.21e-08!18;UBERON:0004852!6.21e-08!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.45e-08;18!UBERON:0001986;2.45e-08;18!UBERON:0004852;2.45e-08;18!UBERON:0000487;1.23e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004638;2.45e-08;18!UBERON:0001986;2.45e-08;18!UBERON:0004852;2.45e-08;18!UBERON:0000487;1.23e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.53e-09,78;UBERON:0007798,1.53e-09,78;UBERON:0000055,5.13e-09,68;UBERON:0004638,1.21e-08,18;UBERON:0001986,1.21e-08,18;UBERON:0004852,1.21e-08,18;UBERON:0007500,1.92e-08,59;UBERON:0001981,1.92e-08,59;UBERON:0004537,1.92e-08,59;UBERON:0006965,1.92e-08,59;UBERON:0000487,7.63e-08,22;UBERON:0004872,9.96e-08,83;UBERON:0003498,2.97e-07,5;UBERON:0005985,2.97e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.09220686065086,0.527533956456907,0,0,0,1.20538905604795,1.46062018077475,0.487932798790507,2.83178433576612,1.02000345622126,1.25381888591235,6.5834277040143,8.34933992944594,7.15593045690376,0,0,0,0,0,0,1.83884244895785,0,0,0.46480320348181,0.284338464974843,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.12786256184353,0.361439152384566,0,0.144846518960824,0.795285947051099,0,1.98523116044542,2.21729397462564,1.93236528524877,0.654895377488563,0,0.370784442784429,0,0,0,0,0,0,1.59009925893364,1.72046919021225,1.04142150482278,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.258416759169329,0.35576626268671,0,5.23678112241891,1.52054421143703,3.1728067481262,1.47065232138347,0,0.982297011124877,0.898117490504679,1.80178368773316,1.53316637465883,2.84779697870439,1.09921046358244,0,0,0.436094052142534,0,0.506522046658319,0,0.286836620748814,1.41867352879343,0.560677600142307,0,0.49333509683432,0.311211035399766,0.67355336034844,1.47115712802113,0,0,0.234321431833797,0,0.570471821544449,0,0.23486899728753,0.647491777472526,0.140450806702248,0,0.737005903870608,0,0,0,0,0,1.0100166837244,0.125118519871964,0.277064115484183,0,0.30648779579902,0.300476117813194,1.24775401476023,0.358779271377724,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0,1.06502877754984,0.201504196455281,0.169560592310488,0.193260853163297,0.272746120590835,1.14721838155602,4.02513230227665,6.36142887943129,6.27447291495399,3.00617059544574,6.56034212276634,6.56959246336494,0,0,1.38134921352481,0,0,1.18306800039844,0.842923450390509,0.723033089650446,0.441175890929576,0.435758888184812,0.949082476444386,1.75280700608214,1.56977172100277,0.38474715694639,1.4763109092493,0,0,0,0,0,0,0,0.245976877086227,0.686271241194102,0.109750285408626,0,1.10581869652794,0.185176890317059,0,0,0,2.89826012437692,0.117408694235822,2.16549671641611,1.38895653772983,1.33177906564219,0.790204397959275,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0.839910640994298,0.850650583454319,0.358234090811393,0.290633938513962,2.30029607499127,0,0.176096868026452,0.207328115540772,0,0.25248486685276,0.380987365753014,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,1.12131084345361,0.43596006883328,1.0267360014933,0,0,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,0,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0.224170287987055,0,0,0,1.77866236955724,3.90419561572865,3.09315525111078,0.670065061337395,1.91381625495949,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0.664225598535437,0.368738337083406,0.260650843404249,0.195801157462741,0,0,0,0,0.303127571446259,1.66435439510497,2.11673205330776,0,0,0,0,0,0,0,0.462629081407967,0,0.246381468041427,0,0.232420756919918,0.120859449591622,0.40101294060657,0,0.229628896329213,0.546273504020151,0,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0.340187410553031,1.0795795805107,0,0.541892875087706,0.501689773854853,0,0,1.56712328305525,0,0,0,0,0,0.206082023295445,0.457847324091717,0.247528499761764,0,0,0,0.193341436584244,0.154048617114644,0.460511024178389,0.137836572484531,0.214840489736547,0.145016693914229,0.340906509664404,0,0,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0.6970372701606,0,0,0,0.37064843820784,0.572499546967965,0.372158369359667,0,0,0.255897791311334,0,0.636406495851874,1.56989728039846,0,0,0,1.01091240786658,1.58510321173008,1.68503382495592,0.48763373908959,0,0,0.409499734223957,0,1.13008116620243,0,0,0,0,0,1.01455188481352,0.92947049429925,1.40847801266121,0.573645408816206,0,1.07001315444375,0.354761064070598,0,0.329294892959902,0.379473173765715,0.349934720244983,0.384888450902048,0.670302275535787,0,0.188287601553558,0.86101074534246,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.961416640147258,8.66231869737023,3.43056302373444,0.185803175125719,0.577076851905779,0.213425530045242,0.797131363644112,0.199579371432817,0.957526850661834,0,0,0.280797178113459,2.05411211129873,0.156679895773023,0,0.169291777801603,0.481764225311099,0.80719882876419,0.425846237690326,0.343505344755765,0.921722292925374,0.223676107892416,0.166849141711909,0.586164286206121,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0.293016358543788,0.728163130497081,0.222886768554957,1.13654458722565,0,0,0,0.994147647766298,0.281338832821026,0.111308705022906,0,0.63337622438398,0.19924798825107,0,0.251932747854276,2.14764233254525,0,0,0.449341755736634,0,0,0,0,0,0,0.371072392647405,0,0,0,0,2.27586896570999,0,4.49136595359079,0.689486746482929,0,0.520874984799877,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0.153900517007594,0,0,0,0.108647371922008,0.63800231946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| ||
|short_description=p6@STMN1 | |short_description=p6@STMN1 | ||
}} | }} |
Latest revision as of 04:18, 17 September 2015
Short description: | p6@STMN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_STMN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 122bp_to_ENST00000399728, NM_203401, uc001bkz.2_5end |
EntrezGene: | STMN1 |
HGNC: | 6510 |
UniProt: | P16949 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.65e-20 | 25 |
neurectodermal cell | 4.70e-14 | 59 |
embryonic cell | 1.08e-13 | 250 |
epithelial cell | 7.89e-13 | 253 |
neuron associated cell | 5.00e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 5.00e-12 | 17 |
oligodendrocyte | 1.24e-11 | 7 |
macroglial cell | 1.24e-11 | 7 |
astrocyte | 1.24e-11 | 7 |
oligodendrocyte precursor cell | 1.24e-11 | 7 |
ectodermal cell | 4.92e-11 | 72 |
neuronal stem cell | 3.79e-10 | 8 |
endothelial cell of vascular tree | 7.18e-10 | 24 |
embryonic stem cell | 9.12e-10 | 5 |
glial cell (sensu Vertebrata) | 2.51e-09 | 15 |
glial cell | 2.51e-09 | 15 |
glioblast | 2.51e-09 | 15 |
glioblast (sensu Vertebrata) | 2.51e-09 | 15 |
blood vessel endothelial cell | 1.21e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.21e-08 | 18 |
migratory neural crest cell | 4.55e-08 | 41 |
endothelial cell | 2.57e-07 | 36 |
neuron | 2.73e-07 | 6 |
neuroblast | 2.73e-07 | 6 |
electrically signaling cell | 2.73e-07 | 6 |
astrocyte of the cerebral cortex | 9.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vasculature | 1.53e-09 | 78 |
vascular system | 1.53e-09 | 78 |
vessel | 5.13e-09 | 68 |
blood vessel endothelium | 1.21e-08 | 18 |
endothelium | 1.21e-08 | 18 |
cardiovascular system endothelium | 1.21e-08 | 18 |
epithelial tube open at both ends | 1.92e-08 | 59 |
blood vessel | 1.92e-08 | 59 |
blood vasculature | 1.92e-08 | 59 |
vascular cord | 1.92e-08 | 59 |
simple squamous epithelium | 7.63e-08 | 22 |
splanchnic layer of lateral plate mesoderm | 9.96e-08 | 83 |
heart blood vessel | 2.97e-07 | 5 |
coronary vessel | 2.97e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.91e-10 | 106 |
cell type cancer | 1.76e-07 | 143 |