FFCP PHASE1:Hg19::chr17:71640572..71640594,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:71640572..71640594,- to FFCP PHASE1:Hg19::chr17:71640572..71640594,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54549 | |EntrezGene=54549 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19308 | |HGNC=19308 | ||
|TSSclassifier=strong | |||
|UniProt=C9JBW3,Q58EX2 | |UniProt=C9JBW3,Q58EX2 | ||
|association_with_transcript=-345bp_to_ENST00000316893,ENST00000388726,ENST00000392650,NM_001144952,uc010dfm.2_5end | |||
|cluster_id=chr17:71640572..71640594,- | |||
|description=CAGE_peak_1_at_SDK2_5end | |||
|id=chr17:71640572..71640594,- | |||
|ontology_enrichment_celltype=CL:0002076!1.44e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.48e-09;13!CL:0000039;2.92e-09;7!CL:0000586;2.92e-09;7!CL:0000236;6.38e-08;13!CL:0000622;2.16e-07;5!CL:0002076;3.32e-07;42!CL:0002159;7.84e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.50e-09,13;CL:0000039,3.33e-09,7;CL:0000586,3.33e-09,7;CL:0002076,1.85e-08,42;CL:0000622,2.21e-07,5;CL:0000236,4.89e-07,14;CL:0002159,6.16e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;8.58e-10;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30923703268758,2.65200898617529,1.25381888591235,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0.383829398097213,0.619264493264304,18.3884244895785,29.5181800402685,12.9413903558376,0,0,2.93600439334847,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0.182664153764634,5.27988733383968,1.09227722252426,0.889509253863555,1.70692089026603,2.00197993518006,3.4485146397269,4.62731410949403,2.86216126360609,4.55370375287559,2.34894875748376,2.29363936875137,3.96513985737078,0.560508562981536,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.552700035571697,0,0.296573126324121,0.802622484269139,0,0.339928028092699,0,0,0.506039384039006,0,0.651083453856419,1.90090408889675,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0,0,0.868946423296794,0,0,0.255725123687061,0.361439152384566,0,2.89693037921647,8.74814541756209,18.4921250715002,0.189069634328136,0.443458794925128,0.966182642624386,2.5540919722054,2.91436230634034,5.93255108455087,0,0,0,2.8618874916641,1.71598473234038,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5189156164186,0,0,0,0,0,0.560677600142307,0,0,0,0,0,1.36221684880438,1.72852777344,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0,0,0,0,0,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0,12.1754337492877,16.3647672354501,14.3402297694502,3.04934265323988,4.5060121229305,2.44007280025989,7.87824018116815,2.77552935963191,1.82488679537915,15.6449532329816,13.5080597020506,13.8134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,4.41026134156626,0,0,0,0,0.368965315629341,1.3725424823882,13.7187856760782,3.37205259772859,1.3068766413512,2.12953423864618,0,0,0,1.15930404975077,0.234817388471643,0,0,0,1.58040879591855,0.858486162094873,0,0,0,1.87467667973554,14.2784808969031,12.0508832656029,6.35865511190223,10.4628217865026,14.9519244874432,0.985326475791887,1.05658120815871,1.86595303986695,0.576479813667846,1.38866676769018,0.063497894292169,0,0,0,0,0,0,0.672786506072164,1.74384027533312,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,4.22015127883421,0.871533458600294,2.49932477955143,0,0,0,0.958499421966331,2.29723871668228,0,0.144781306667579,0,0,0,0,0.215627574859517,0.128343036279748,3.30323011489202,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,1.71571711905428,0.82707210449155,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,27.8703993721566,4.32780647998713,0,0,0,0,0.616122696835318,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0,0,0,0,0,0,1.02580050046556,0,0,2.06082023295445,1.00726411300178,0.82509499920588,12.0595762979196,17.5516266429861,0,0.386682873168488,0,0.15350367472613,0.413509717453592,0,0,0.170453254832202,3.29418531892928,6.61139661443912,18.06586633232,24.5016407989602,13.5551426346437,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.539617372749944,1.09814811894422,1.41374882814824,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,5.48466042535419,14.7466500617873,23.956016669491,2.07116361708914,13.3456665528081,13.47771805341,17.737206141467,4.59446800413919,0,0,2.27858874869665,0.476463550915578,1.23408681925858,0.648473311192717,0.540031437238115,1.58625035258854,0.320472213382419,27.9119158026374,0,0,2.01976898167023,0,0.478278818186467,0,0,0,0.649243880549111,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0.422250816255987,8.16916751829386,2.76283915531148,0,0,0,0,0,0,0.511572370226872,0.493217028184668,0,0,0,0,1.99613798001194,5.98983850496036,0,1.44999915086959,0.910347586283997,0,0.472775363535873,2.41320361269025,0,0.694499979733169,0,0.120596438625408,0,0,0,0.87754158861589,0,2.92789862985067,3.23191085715948,0.227884111694002,22.5952626300299,14.0021925279245,11.7339161675769,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,1.99052386215701,0.0884575645033392,1.83309043480088,0,0,0,0.337005664903385,5.61804353109152,0.234264445725339,0,0.782658475728359,0,0,2.41981432097328,1.22429104652196,0.884612114798832,1.35291077473043,1.34794648816421,5.31723098165748,0.992975867626496,5.02292669451561,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0.19871461170299,0.126621591911757,0.391102765469606,0,0.85381197895741,0.799238438328521,0.144090417154106,2.51980511565014,2.23073497220554,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0,0.136905378891993,30.6591811360734,0,0,2.51354161145029,0.687481272035051,1.43574604915363,1.19807400299395,0.429226048136571,0.223171457441873,0.671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0.643012593860077,0.550157746388935,0.83088067605837,0.449947783103001,0,0.182248669974074,5.70238968918752,0.709251365692784,1.41627387964495,0,0,0,2.1440859791201,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.293104467356165,0,0.387848869084652,0.52893040697076,2.22412889249628,0,0.854299300541557,2.51526888159466,2.48543433208317,1.9846640872478,0,0,1.91502377331055,0,0,0,0,4.08340650250609,0,0.488105059607853,0.1251909307065,1.14681839138014,0.443716206147409,1.1177352529449,43.9948659097214,1.8747061194316,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.450772826991655,3.04644169735036,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,3.43106546199881,1.56596575179127,0,0,0,0,1.85280868296583,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0.974301544196942,0.132864840313363,0.654261577023377,0,0,0,0.19998739585493,0.106691729694141,0,0,0,1.81843360035278,1.24415452006595,0,0,0,0.109209638192014,0,2.76347396132188,0,0,0.318004350653419,3.15446980005013,0.80057074828547,0,1.531227386766,0.0642292250964595,0,0.319267718114302,0,1.00828678488687,0.207471757392654,0,0,0,0,0,0,0,0,5.56965421925569,0.451261970095544,0,0,26.9763895315865,0,0,0.0675375846183947,0,0.413373593002368,0,1.64092442705466,0,0,0,0.255524855279191,0.535701835878287,0,0,0.91064876540519,1.77404740325278,0,0,0.951576261675644,0.131545547125698,0,0,0.863424021355654,0,0,4.56579360254748,0,0,1.21510125100316,5.3724627989127,0,13.7348035119038,0,10.3608082081518,17.9254400948647,24.8853478253073,1.29068207646083,0,0,0.423387050190929,0.68732060563215,0,0.955538938977433,0.447421727191169,0,0,0,0,15.0775876073966,3.39997695141398,33.9212222020053,0,3.09192236021678,0.33883824611688,4.61750170330802,1.20770274853339,0.0771741581079447,0.437119121007915,3.76253837089218,0.245148321753905,0,2.1593931382644,1.48523200163543,4.6492130034174,0,1.69171052363736,2.06265241515447,0,0.892769693028288,0,0,1.46067277649303,0.917458566809082,0.573358332605805,19.5636737119549,0.203974470572744,0.872701380680755,1.0580536810308,0,0.924351257262837,0,9.08398258812568,4.47988845051152,20.9052526668871,16.1142350992331,5.61156551057677,18.378979906969,3.0084904715085,2.5006970412019,7.502995644373,0.829169439458779,0.103432995861895,1.49263787330687,7.61806180683969,0.129177819672012,0.372448285775147,0,0.25458863311266,3.84022659020617,0.653150243690884,0.684466602170562,1.41439311330634,1.86477734020959,8.64916927019635,0,0,0,0,0,1.58913877437726,10.9861968145249,3.99454064511308,2.01273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,4.30923703268758,2.65200898617529,1.25381888591235,0.286235987131057,0.410623275218653,0.251085279189606,0,0,0,0,0.383829398097213,0.619264493264304,18.3884244895785,29.5181800402685,12.9413903558376,0,0,2.93600439334847,0,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0.182664153764634,5.27988733383968,1.09227722252426,0.889509253863555,1.70692089026603,2.00197993518006,3.4485146397269,4.62731410949403,2.86216126360609,4.55370375287559,2.34894875748376,2.29363936875137,3.96513985737078,0.560508562981536,0.526768169550154,0.196709770113833,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0.552700035571697,0,0.296573126324121,0.802622484269139,0,0.339928028092699,0,0,0.506039384039006,0,0.651083453856419,1.90090408889675,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0,0,0.868946423296794,0,0,0.255725123687061,0.361439152384566,0,2.89693037921647,8.74814541756209,18.4921250715002,0.189069634328136,0.443458794925128,0.966182642624386,2.5540919722054,2.91436230634034,5.93255108455087,0,0,0,2.8618874916641,1.71598473234038,2.60020250930695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.5189156164186,0,0,0,0,0,0.560677600142307,0,0,0,0,0,1.36221684880438,1.72852777344,0,0,0.570471821544449,0,0,0.161872944368132,0,0,0,0,0,0,0.910161361938026,0.718618141816238,0,0,0,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0,0,0,0,0,0,0.0920498986422993,0,1.06502877754984,0.10075209822764,0,12.1754337492877,16.3647672354501,14.3402297694502,3.04934265323988,4.5060121229305,2.44007280025989,7.87824018116815,2.77552935963191,1.82488679537915,15.6449532329816,13.5080597020506,13.8134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,4.41026134156626,0,0,0,0,0.368965315629341,1.3725424823882,13.7187856760782,3.37205259772859,1.3068766413512,2.12953423864618,0,0,0,1.15930404975077,0.234817388471643,0,0,0,1.58040879591855,0.858486162094873,0,0,0,1.87467667973554,14.2784808969031,12.0508832656029,6.35865511190223,10.4628217865026,14.9519244874432,0.985326475791887,1.05658120815871,1.86595303986695,0.576479813667846,1.38866676769018,0.063497894292169,0,0,0,0,0,0,0.672786506072164,1.74384027533312,0.22001485746285,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,4.22015127883421,0.871533458600294,2.49932477955143,0,0,0,0.958499421966331,2.29723871668228,0,0.144781306667579,0,0,0,0,0.215627574859517,0.128343036279748,3.30323011489202,2.60279707715243,0,0.167516265334349,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,1.71571711905428,0.82707210449155,0.431428401637234,0.106727557803444,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,27.8703993721566,4.32780647998713,0,0,0,0,0.616122696835318,0,0,0.211103257785751,0,0.340187410553031,0,0,0,0,0,0,0,0,0,1.02580050046556,0,0,2.06082023295445,1.00726411300178,0.82509499920588,12.0595762979196,17.5516266429861,0,0.386682873168488,0,0.15350367472613,0.413509717453592,0,0,0.170453254832202,3.29418531892928,6.61139661443912,18.06586633232,24.5016407989602,13.5551426346437,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.539617372749944,1.09814811894422,1.41374882814824,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699869440489966,5.48466042535419,14.7466500617873,23.956016669491,2.07116361708914,13.3456665528081,13.47771805341,17.737206141467,4.59446800413919,0,0,2.27858874869665,0.476463550915578,1.23408681925858,0.648473311192717,0.540031437238115,1.58625035258854,0.320472213382419,27.9119158026374,0,0,2.01976898167023,0,0.478278818186467,0,0,0,0.649243880549111,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,0.422250816255987,8.16916751829386,2.76283915531148,0,0,0,0,0,0,0.511572370226872,0.493217028184668,0,0,0,0,1.99613798001194,5.98983850496036,0,1.44999915086959,0.910347586283997,0,0.472775363535873,2.41320361269025,0,0.694499979733169,0,0.120596438625408,0,0,0,0.87754158861589,0,2.92789862985067,3.23191085715948,0.227884111694002,22.5952626300299,14.0021925279245,11.7339161675769,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0.141353071433941,0.216388639742091,1.99052386215701,0.0884575645033392,1.83309043480088,0,0,0,0.337005664903385,5.61804353109152,0.234264445725339,0,0.782658475728359,0,0,2.41981432097328,1.22429104652196,0.884612114798832,1.35291077473043,1.34794648816421,5.31723098165748,0.992975867626496,5.02292669451561,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0.290967049465258,0,1.12990370390266,0,0.19871461170299,0.126621591911757,0.391102765469606,0,0.85381197895741,0.799238438328521,0.144090417154106,2.51980511565014,2.23073497220554,0,0,0.235694034616795,0.271808412147228,0.104602846312333,0,0,0,0.136905378891993,30.6591811360734,0,0,2.51354161145029,0.687481272035051,1.43574604915363,1.19807400299395,0.429226048136571,0.223171457441873,0.671834724867263,0,0,0,0,0,0,0,0,0.544813624446302,0.643012593860077,0.550157746388935,0.83088067605837,0.449947783103001,0,0.182248669974074,5.70238968918752,0.709251365692784,1.41627387964495,0,0,0,2.1440859791201,0,0.25426853765475,0,0,0,0,0.082092520749339,0.170388021785422,0.113312091520126,0.293104467356165,0,0.387848869084652,0.52893040697076,2.22412889249628,0,0.854299300541557,2.51526888159466,2.48543433208317,1.9846640872478,0,0,1.91502377331055,0,0,0,0,4.08340650250609,0,0.488105059607853,0.1251909307065,1.14681839138014,0.443716206147409,1.1177352529449,43.9948659097214,1.8747061194316,0,0,0,0,0.869526171664951,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0.450772826991655,3.04644169735036,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,3.43106546199881,1.56596575179127,0,0,0,0,1.85280868296583,0,0,0,0,0.512483037175893,0,0,0.138258436151731,0.974301544196942,0.132864840313363,0.654261577023377,0,0,0,0.19998739585493,0.106691729694141,0,0,0,1.81843360035278,1.24415452006595,0,0,0,0.109209638192014,0,2.76347396132188,0,0,0.318004350653419,3.15446980005013,0.80057074828547,0,1.531227386766,0.0642292250964595,0,0.319267718114302,0,1.00828678488687,0.207471757392654,0,0,0,0,0,0,0,0,5.56965421925569,0.451261970095544,0,0,26.9763895315865,0,0,0.0675375846183947,0,0.413373593002368,0,1.64092442705466,0,0,0,0.255524855279191,0.535701835878287,0,0,0.91064876540519,1.77404740325278,0,0,0.951576261675644,0.131545547125698,0,0,0.863424021355654,0,0,4.56579360254748,0,0,1.21510125100316,5.3724627989127,0,13.7348035119038,0,10.3608082081518,17.9254400948647,24.8853478253073,1.29068207646083,0,0,0.423387050190929,0.68732060563215,0,0.955538938977433,0.447421727191169,0,0,0,0,15.0775876073966,3.39997695141398,33.9212222020053,0,3.09192236021678,0.33883824611688,4.61750170330802,1.20770274853339,0.0771741581079447,0.437119121007915,3.76253837089218,0.245148321753905,0,2.1593931382644,1.48523200163543,4.6492130034174,0,1.69171052363736,2.06265241515447,0,0.892769693028288,0,0,1.46067277649303,0.917458566809082,0.573358332605805,19.5636737119549,0.203974470572744,0.872701380680755,1.0580536810308,0,0.924351257262837,0,9.08398258812568,4.47988845051152,20.9052526668871,16.1142350992331,5.61156551057677,18.378979906969,3.0084904715085,2.5006970412019,7.502995644373,0.829169439458779,0.103432995861895,1.49263787330687,7.61806180683969,0.129177819672012,0.372448285775147,0,0.25458863311266,3.84022659020617,0.653150243690884,0.684466602170562,1.41439311330634,1.86477734020959,8.64916927019635,0,0,0,0,0,1.58913877437726,10.9861968145249,3.99454064511308,2.01273793591026,0 | ||
|short_description=p1@SDK2 | |||
}} | }} |
Latest revision as of 06:22, 17 September 2015
Short description: | p1@SDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDK2_5end |
Coexpression cluster: | NA |
Association with transcript: | -345bp_to_ENST00000316893, ENST00000388726, ENST00000392650, NM_001144952, uc010dfm.2_5end |
EntrezGene: | SDK2 |
HGNC: | 19308 |
UniProt: | C9JBW3Q58EX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.50e-09 | 13 |
germ line cell | 3.33e-09 | 7 |
germ cell | 3.33e-09 | 7 |
endo-epithelial cell | 1.85e-08 | 42 |
acinar cell | 2.21e-07 | 5 |
B cell | 4.89e-07 | 14 |
general ecto-epithelial cell | 6.16e-07 | 14 |