FFCP PHASE1:Hg19::chr12:127256819..127256831,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=387895 | |EntrezGene=387895 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000536517,NR_033878_5end | |association_with_transcript=-11bp_to_ENST00000536517,NR_033878_5end | ||
|cluster_id=chr12:127256819..127256831,- | |||
|description=CAGE_peak_2_at_LOC387895_5end | |description=CAGE_peak_2_at_LOC387895_5end | ||
|id=chr12:127256819..127256831,- | |id=chr12:127256819..127256831,- | ||
|ontology_enrichment_celltype=CL:0000542!5.93e-18!53;CL:0000051!5.93e-18!53;CL:0000791!3.46e-17!18;CL:0000789!3.46e-17!18;CL:0002420!3.46e-17!18;CL:0002419!3.46e-17!18;CL:0000790!3.46e-17!18;CL:0000838!5.32e-17!52;CL:0000084!3.33e-12!25;CL:0000827!3.33e-12!25;CL:0000625!7.42e-12!11;CL:0002087!4.31e-10!119;CL:0000738!2.16e-08!140;CL:0002031!3.16e-07!124 | |ontology_enrichment_celltype=CL:0000542!5.93e-18!53;CL:0000051!5.93e-18!53;CL:0000791!3.46e-17!18;CL:0000789!3.46e-17!18;CL:0002420!3.46e-17!18;CL:0002419!3.46e-17!18;CL:0000790!3.46e-17!18;CL:0000838!5.32e-17!52;CL:0000084!3.33e-12!25;CL:0000827!3.33e-12!25;CL:0000625!7.42e-12!11;CL:0002087!4.31e-10!119;CL:0000738!2.16e-08!140;CL:0002031!3.16e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000623;6.17e-21;3!CL:0000791;8.84e-13;18!CL:0000789;8.84e-13;18!CL:0002419;8.84e-13;18!CL:0002149;1.55e-10;6!CL:0002255;1.55e-10;6!CL:0000625;7.44e-10;11!CL:0000084;4.66e-09;25!CL:0000542;2.63e-08;53!CL:0002127;5.58e-08;1!CL:0000911;5.58e-08;1!CL:0000319;5.58e-08;1!CL:0000814;5.58e-08;1 | |ontology_enrichment_celltype_v019=CL:0000623;6.17e-21;3!CL:0000791;8.84e-13;18!CL:0000789;8.84e-13;18!CL:0002419;8.84e-13;18!CL:0002149;1.55e-10;6!CL:0002255;1.55e-10;6!CL:0000625;7.44e-10;11!CL:0000084;4.66e-09;25!CL:0000542;2.63e-08;53!CL:0002127;5.58e-08;1!CL:0000911;5.58e-08;1!CL:0000319;5.58e-08;1!CL:0000814;5.58e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.40e-21,3;CL:0000825,2.40e-21,3;CL:0000542,5.64e-16,53;CL:0000051,5.64e-16,53;CL:0000838,1.05e-13,52;CL:0000791,8.88e-13,18;CL:0000789,8.88e-13,18;CL:0002420,8.88e-13,18;CL:0002419,8.88e-13,18;CL:0000790,8.88e-13,18;CL:0002149,1.43e-10,6;CL:0002255,1.43e-10,6;CL:0000625,6.96e-10,11;CL:0000084,4.68e-09,25;CL:0000827,4.68e-09,25;CL:0002087,1.22e-08,115;CL:0000319,2.90e-08,1;CL:0002127,5.05e-08,1;CL:0000914,5.05e-08,1;CL:0000911,5.05e-08,1;CL:0000814,5.05e-08,1;CL:0002042,5.05e-08,1;CL:0002039,5.05e-08,1;CL:0002040,5.05e-08,1;CL:0002041,5.05e-08,1;CL:0002031,5.83e-07,120;CL:0000738,6.52e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;8.84e-13;18!CL:0000051;2.63e-08;53 | |ontology_enrichment_development_v019=CL:0000790;8.84e-13;18!CL:0000051;2.63e-08;53 | ||
|ontology_enrichment_disease=DOID:0050687!2.42e-07!143;DOID:1749!5.34e-07!14;DOID:162!8.48e-07!235 | |ontology_enrichment_disease=DOID:0050687!2.42e-07!143;DOID:1749!5.34e-07!14;DOID:162!8.48e-07!235 | ||
|ontology_enrichment_disease_v019=DOID:3001;1.55e-10;6!DOID:0060085;2.04e-08;1!DOID:3165;2.04e-08;1!DOID:0060121;2.04e-08;1!DOID:2438;2.04e-08;1!DOID:4418;2.04e-08;1!DOID:3030;5.58e-08;1!DOID:12603;5.58e-08;1 | |ontology_enrichment_disease_v019=DOID:3001;1.55e-10;6!DOID:0060085;2.04e-08;1!DOID:3165;2.04e-08;1!DOID:0060121;2.04e-08;1!DOID:2438;2.04e-08;1!DOID:4418;2.04e-08;1!DOID:3030;5.58e-08;1!DOID:12603;5.58e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,1.43e-10,6;DOID:0060085,1.91e-08,1;DOID:3165,1.91e-08,1;DOID:0060121,1.91e-08,1;DOID:2438,1.91e-08,1;DOID:4418,1.91e-08,1;DOID:3030,2.90e-08,1;DOID:12603,1.06e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0.853460445133014,0,0,0.661044872784862,0,0.569212969109448,2.34894875748376,0.764546456250458,0,0,0,0.786839080455332,1.17903228824749,0.822405995998037,0,0,0,0,0.779873198196215,0.294605907474837,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.226618685395132,0.766440987203842,0.68725489096526,0.506039384039006,0.95569624297229,0.651083453856419,0,0.602300476311091,0.76791966692651,1.24930726552346,1.18388626022008,0.821127996921047,0.604820229674197,1.60464117470104,1.30341963494519,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.821905290201534,0.179060963239896,1.34502172792233,1.37921532141349,1.94064817373566,2.18183161675572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0.82707210449155,0,0.960548020230999,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0.524497659837696,0,0,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.732555718546747,0.41254749960294,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0,0,0.245040215981032,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00355669041231,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,1.68798451622422,0.489698424477443,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0.189559738885464,0.300646838828985,0,0,0.992975867626496,0.313932918407225,0,1.42304773014896,0,0,0.489961987071888,0.69647365264322,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0.274083849293502,2.38457534043588,0,0,0.480952921509202,0,0.39961921916426,0,0,0,0,3.10631338913581,0,0,0.313808538937,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0.453248366080503,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0.395223263795889,0.852548188666271,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0.941063278792687,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0.147855149989634,0,0,0,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0.385239660814607,2.78774068787403,0,0.226705925512272,0,0.489473409012935,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0.655219697692825,1.72041036127604,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.490738592505128,0,0,0.115525666150338,0.762764190934334,0,0,0,0.40341013740704,0,0,0,0.739280431085226,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0,0,1.14553434272025,1.5510319283216,0.955538938977433,0,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.563903507879121,0,0.199882311849858,0.71421575442263,0,0.802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0.672791175483681,0,0,0.217716747896961,0,0.606168477131288,0.0717222053926763,0,0.325613074443898,1.17400080465487,0,0.179650404213174,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0,0,0,0,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,1.63841583378639,0.889509253863555,0.853460445133014,0,0,0.661044872784862,0,0.569212969109448,2.34894875748376,0.764546456250458,0,0,0,0.786839080455332,1.17903228824749,0.822405995998037,0,0,0,0,0.779873198196215,0.294605907474837,0.443067789167242,0.541607727530031,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.226618685395132,0.766440987203842,0.68725489096526,0.506039384039006,0.95569624297229,0.651083453856419,0,0.602300476311091,0.76791966692651,1.24930726552346,1.18388626022008,0.821127996921047,0.604820229674197,1.60464117470104,1.30341963494519,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.821905290201534,0.179060963239896,1.34502172792233,1.37921532141349,1.94064817373566,2.18183161675572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0.82707210449155,0,0.960548020230999,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.355123450626254,0,0,0,0,0,0,0,0,0.524497659837696,0,0,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.732555718546747,0.41254749960294,0,0,0,0.290012154876366,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,1.13929437434833,0.238231775457789,0.822724546172388,0,0,0.79312517629427,0,0,0.245040215981032,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00355669041231,0,0,0,0,0,0.409074730008619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.167821586975843,0,0,1.68798451622422,0.489698424477443,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0.364909578431332,0.19566461893209,0,0,0,0,0.189559738885464,0.300646838828985,0,0,0.992975867626496,0.313932918407225,0,1.42304773014896,0,0,0.489961987071888,0.69647365264322,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.0969890164884194,0,0,0.274083849293502,2.38457534043588,0,0,0.480952921509202,0,0.39961921916426,0,0,0,0,3.10631338913581,0,0,0.313808538937,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0.453248366080503,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0.496166021811951,0.395223263795889,0.852548188666271,1.91502377331055,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.138348634936231,0.124980407962107,0.151649117541648,0.285465333544967,0.941063278792687,0,0,0,0,0,0.378806010550178,0,0,0,0,0,0.147855149989634,0,0,0,0,0,1.04349012362347,0,0,0,0.181848659202559,0,0,0,0,0,0.336749488765919,0,0.385239660814607,2.78774068787403,0,0.226705925512272,0,0.489473409012935,0,0,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0.655219697692825,1.72041036127604,0,0.19998739585493,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.490738592505128,0,0,0.115525666150338,0.762764190934334,0,0,0,0.40341013740704,0,0,0,0.739280431085226,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0,0.222462803784138,0,0,0,0,0.215927591218621,0.47775168788705,0.0714765441766563,0,0,0.347716544605159,0,0,0,0,0,0,0,0,1.14553434272025,1.5510319283216,0.955538938977433,0,0,0,0.647428837187895,0,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.563903507879121,0,0.199882311849858,0.71421575442263,0,0.802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.476128862927481,0,0,0.672791175483681,0,0,0.217716747896961,0,0.606168477131288,0.0717222053926763,0,0.325613074443898,1.17400080465487,0,0.179650404213174,0,0,0,0,1.20764276154616,0 | ||
|short_description=p2@LOC387895 | |short_description=p2@LOC387895 | ||
}} | }} |
Latest revision as of 06:25, 17 September 2015
Short description: | p2@LOC387895 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC387895_5end |
Coexpression cluster: | NA |
Association with transcript: | -11bp_to_ENST00000536517, NR_033878_5end |
EntrezGene: | LOC387895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 2.40e-21 | 3 |
pro-NK cell | 2.40e-21 | 3 |
lymphocyte | 5.64e-16 | 53 |
common lymphoid progenitor | 5.64e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.05e-13 | 52 |
mature alpha-beta T cell | 8.88e-13 | 18 |
alpha-beta T cell | 8.88e-13 | 18 |
immature T cell | 8.88e-13 | 18 |
mature T cell | 8.88e-13 | 18 |
immature alpha-beta T cell | 8.88e-13 | 18 |
epithelial cell of uterus | 1.43e-10 | 6 |
stromal cell of endometrium | 1.43e-10 | 6 |
CD8-positive, alpha-beta T cell | 6.96e-10 | 11 |
T cell | 4.68e-09 | 25 |
pro-T cell | 4.68e-09 | 25 |
nongranular leukocyte | 1.22e-08 | 115 |
mucus secreting cell | 2.90e-08 | 1 |
innate effector T cell | 5.05e-08 | 1 |
immature NK T cell | 5.05e-08 | 1 |
effector T cell | 5.05e-08 | 1 |
mature NK T cell | 5.05e-08 | 1 |
immature NK T cell stage IV | 5.05e-08 | 1 |
immature NK T cell stage I | 5.05e-08 | 1 |
immature NK T cell stage II | 5.05e-08 | 1 |
immature NK T cell stage III | 5.05e-08 | 1 |
hematopoietic lineage restricted progenitor cell | 5.83e-07 | 120 |
leukocyte | 6.52e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.43e-10 | 6 |
organ system benign neoplasm | 1.91e-08 | 1 |
skin benign neoplasm | 1.91e-08 | 1 |
integumentary system benign neoplasm | 1.91e-08 | 1 |
dermis tumor | 1.91e-08 | 1 |
cutaneous fibrous histiocytoma | 1.91e-08 | 1 |
mucinous adenocarcinoma | 2.90e-08 | 1 |
acute leukemia | 1.06e-07 | 1 |