FFCP PHASE1:Hg19::chr16:5956033..5956073,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:5956033..5956073,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr16:5956033..5956073,- | |description=CAGE_peak_at_chr16:5956033..5956073,- | ||
Latest revision as of 06:42, 17 September 2015
| Short description: | p@chr16:5956033..5956073, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr16:5956033..5956073, - |
| Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr16:5956033..5956073- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 8.39e-25 | 3 |
| ciliated epithelial cell | 8.39e-25 | 3 |
| multi-ciliated epithelial cell | 8.39e-25 | 3 |
| non-pigmented ciliary epithelial cell | 8.39e-25 | 3 |
| epithelial cell of Malassez | 5.90e-12 | 3 |
| pigment cell (sensu Vertebrata) | 2.67e-09 | 1 |
| iris pigment epithelial cell | 2.67e-09 | 1 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| atypical epithelium | 2.50e-32 | 4 |
| ciliary epithelium | 8.39e-25 | 3 |
| ciliary body | 8.39e-25 | 3 |
| vasculature of eye | 1.13e-21 | 6 |
| uvea | 1.13e-21 | 6 |
| vasculature of head | 1.13e-21 | 6 |
| pigment epithelium of eye | 2.38e-18 | 11 |
| anterior segment of eyeball | 2.11e-14 | 14 |
| vasculature of organ | 6.10e-12 | 11 |
| head | 1.71e-10 | 56 |
Showing 1 to 10 of 42 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow cancer | 5.31e-10 | 1 |
| myeloma | 5.31e-10 | 1 |
| non-Hodgkin lymphoma | 6.31e-10 | 1 |
| cutaneous T cell lymphoma | 6.31e-10 | 1 |
| mycosis fungoides | 6.31e-10 | 1 |
| organ system benign neoplasm | 1.48e-09 | 1 |
| skin benign neoplasm | 1.48e-09 | 1 |
| integumentary system benign neoplasm | 1.48e-09 | 1 |
| dermis tumor | 1.48e-09 | 1 |
| cutaneous fibrous histiocytoma | 1.48e-09 | 1 |
Showing 1 to 10 of 10 entries
