FFCP PHASE1:Hg19::chr11:2022489..2022501,-: Difference between revisions
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|id=chr11:2022489..2022501,-
|short_description=p37@H19
|description=CAGE_peak_37_at_H19_5end
|association_with_transcript=198bp_to_ENST00000428066_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=198bp_to_ENST00000428066_5end | |||
|cluster_id=chr11:2022489..2022501,- | |||
|coexpression_cluster_id=C232 | |||
|description=CAGE_peak_37_at_H19_5end | |||
|id=chr11:2022489..2022501,- | |||
|ontology_enrichment_celltype=CL:0002322!2.64e-12!5;CL:0002159!4.18e-07!13;CL:0002077!8.56e-07!33 | |||
|ontology_enrichment_celltype_v019=CL:0002322;6.04e-53;5!CL:0002321;5.54e-18;15!CL:0002336;8.72e-18;1!CL:0002261;8.72e-18;1!CL:0002170;8.72e-18;1!CL:0000148;1.42e-15;10!CL:0000147;2.62e-11;14!CL:0000317;1.44e-09;2!CL:1000448;1.44e-09;2!CL:0002308;1.44e-09;2!CL:0002140;1.44e-09;2!CL:0000710;4.35e-08;20!CL:0002077;1.02e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.10e-53,5;CL:0002336,1.70e-17,1;CL:0002261,1.70e-17,1;CL:0002170,1.70e-17,1;CL:0000148,1.36e-15,10;CL:0000541,1.36e-15,10;CL:0000147,2.53e-11,14;CL:0000317,1.57e-09,2;CL:1000448,1.57e-09,2;CL:0002308,1.57e-09,2;CL:0002140,1.57e-09,2;CL:0002077,4.13e-08,34;CL:0000710,4.25e-08,20 | |||
|ontology_enrichment_development_v019=UBERON:0010226;8.72e-18;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.79e-21!57;UBERON:0005068!3.79e-21!57;UBERON:0006241!3.79e-21!57;UBERON:0007135!3.79e-21!57;UBERON:0002020!2.25e-19!34;UBERON:0003528!2.25e-19!34;UBERON:0002780!6.35e-19!41;UBERON:0001890!6.35e-19!41;UBERON:0006240!6.35e-19!41;UBERON:0007023!7.35e-19!115;UBERON:0001869!9.45e-19!32;UBERON:0002616!1.67e-18!59;UBERON:0003080!2.48e-18!42;UBERON:0003075!2.17e-17!86;UBERON:0007284!2.17e-17!86;UBERON:0001893!2.31e-17!34;UBERON:0000955!4.12e-17!69;UBERON:0006238!4.12e-17!69;UBERON:0003056!3.11e-16!61;UBERON:0002346!3.28e-16!90;UBERON:0002791!5.45e-16!33;UBERON:0000033!7.99e-16!123;UBERON:0005743!1.27e-15!86;UBERON:0001017!1.56e-15!82;UBERON:0002619!3.27e-15!22;UBERON:0000153!1.35e-14!129;UBERON:0007811!1.35e-14!129;UBERON:0000073!1.94e-14!94;UBERON:0001016!1.94e-14!94;UBERON:0000956!5.09e-13!25;UBERON:0000203!5.09e-13!25;UBERON:0001950!2.14e-12!20;UBERON:0004121!2.16e-12!169;UBERON:0000924!7.63e-12!173;UBERON:0006601!7.63e-12!173;UBERON:0000200!3.34e-09!6;UBERON:0000025!1.05e-08!194;UBERON:0000481!1.26e-08!347;UBERON:0000475!4.03e-08!365;UBERON:0002308!4.73e-08!9;UBERON:0000125!4.73e-08!9;UBERON:0004111!5.35e-08!241;UBERON:0002771!1.61e-07!3;UBERON:0000477!3.03e-07!286;UBERON:0000988!3.77e-07!3;UBERON:0000349!6.49e-07!5;UBERON:0001871!8.54e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;8.72e-18;1!UBERON:0002082;8.72e-18;1!UBERON:0002419;1.44e-09;2!UBERON:0007771;1.44e-09;2!UBERON:0003297;1.44e-09;2!UBERON:0001821;1.44e-09;2!UBERON:0003487;1.44e-09;2!UBERON:0001820;1.44e-09;2!UBERON:0004151;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,8.72e-18,1;UBERON:0002082,8.72e-18,1;UBERON:0010226,8.72e-18,1;UBERON:0002419,1.57e-09,2;UBERON:0007771,1.57e-09,2;UBERON:0003297,1.57e-09,2;UBERON:0001821,1.57e-09,2;UBERON:0003487,1.57e-09,2;UBERON:0001820,1.57e-09,2;UBERON:0005089,1.57e-09,2;UBERON:0005088,1.57e-09,2;UBERON:0004151,8.62e-07,3 | |||
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| ||
|short_description=p37@H19 | |||
}} | }} |
Latest revision as of 06:59, 17 September 2015
Short description: | p37@H19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_H19_5end |
Coexpression cluster: | C232_teratocarcinoma_HES3GFP_H9_iPS_testicular_neuroblastoma_cerebellum |
Association with transcript: | 198bp_to_ENST00000428066_5end |
EntrezGene: | NA |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.10e-53 | 5 |
buccal mucosa cell | 1.70e-17 | 1 |
endothelial cell of viscerocranial mucosa | 1.70e-17 | 1 |
keratinized cell of the oral mucosa | 1.70e-17 | 1 |
melanocyte | 1.36e-15 | 10 |
melanoblast | 1.36e-15 | 10 |
pigment cell | 2.53e-11 | 14 |
sebum secreting cell | 1.57e-09 | 2 |
epithelial cell of sweat gland | 1.57e-09 | 2 |
epithelial cell of skin gland | 1.57e-09 | 2 |
acinar cell of sebaceous gland | 1.57e-09 | 2 |
ecto-epithelial cell | 4.13e-08 | 34 |
neurecto-epithelial cell | 4.25e-08 | 20 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 8.72e-18 | 1 |
cardiac ventricle | 8.72e-18 | 1 |
future cardiac ventricle | 8.72e-18 | 1 |
skin gland | 1.57e-09 | 2 |
epidermis gland | 1.57e-09 | 2 |
gland of integumental system | 1.57e-09 | 2 |
sebaceous gland | 1.57e-09 | 2 |
skin sebaceous gland | 1.57e-09 | 2 |
sweat gland | 1.57e-09 | 2 |
sweat gland placode | 1.57e-09 | 2 |
sebaceous gland placode | 1.57e-09 | 2 |
cardiac chamber | 8.62e-07 | 3 |