FFCP PHASE1:Hg19::chr5:176981546..176981574,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:176981546..176981574,-
|short_description=p1@FAM193B
|description=CAGE_peak_1_at_FAM193B_5end
|association_with_transcript=0bp_to_NM_001190946,NR_024019_5e...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54540 | |EntrezGene=54540 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25524 | |HGNC=25524 | ||
|TSSclassifier=strong | |||
|UniProt=E9PET5,Q6IPW0 | |UniProt=E9PET5,Q6IPW0 | ||
|association_with_transcript=0bp_to_NM_001190946,NR_024019_5end | |||
|cluster_id=chr5:176981546..176981574,- | |||
|description=CAGE_peak_1_at_FAM193B_5end | |||
|id=chr5:176981546..176981574,- | |||
|ontology_enrichment_celltype=CL:0000838!5.09e-10!52;CL:0000542!1.94e-09!53;CL:0000051!1.94e-09!53;CL:0000791!1.46e-07!18;CL:0000789!1.46e-07!18;CL:0002420!1.46e-07!18;CL:0002419!1.46e-07!18;CL:0000790!1.46e-07!18;CL:0000084!7.80e-07!25;CL:0000827!7.80e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.76e-07;18!CL:0000789;1.76e-07;18!CL:0002419;1.76e-07;18!CL:0000084;9.30e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.09e-10,52;CL:0000542,1.94e-09,53;CL:0000051,1.94e-09,53;CL:0000791,1.46e-07,18;CL:0000789,1.46e-07,18;CL:0002420,1.46e-07,18;CL:0002419,1.46e-07,18;CL:0000790,1.46e-07,18;CL:0000084,7.80e-07,25;CL:0000827,7.80e-07,25 | |||
|ontology_enrichment_development_v019=CL:0000790;1.76e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@FAM193B | |||
}} | }} |
Latest revision as of 07:18, 17 September 2015
Short description: | p1@FAM193B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM193B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001190946, NR_024019_5end |
EntrezGene: | FAM193B |
HGNC: | 25524 |
UniProt: | E9PET5Q6IPW0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.09e-10 | 52 |
lymphocyte | 1.94e-09 | 53 |
common lymphoid progenitor | 1.94e-09 | 53 |
mature alpha-beta T cell | 1.46e-07 | 18 |
alpha-beta T cell | 1.46e-07 | 18 |
immature T cell | 1.46e-07 | 18 |
mature T cell | 1.46e-07 | 18 |
immature alpha-beta T cell | 1.46e-07 | 18 |
T cell | 7.80e-07 | 25 |
pro-T cell | 7.80e-07 | 25 |