FFCP PHASE1:Hg19::chr6:25138306..25138355,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:25138306..25138355,- to FFCP PHASE1:Hg19::chr6:25138306..25138355,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2098 | |HGNC=2098 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=201bp_to_ENST00000462823_5end | |||
|cluster_id=chr6:25138306..25138355,- | |||
|coexpression_cluster_id=C818 | |||
|description=CAGE_peak_4_at_CMAHP_5end | |||
|id=chr6:25138306..25138355,- | |||
|ontology_enrichment_celltype=CL:0000134!7.64e-13!358;CL:0002320!8.84e-12!365;CL:0002087!8.08e-11!119;CL:0000048!9.85e-11!430;CL:0000738!4.74e-10!140;CL:0000988!5.37e-10!182;CL:0000034!6.93e-10!444;CL:0000723!9.59e-10!436;CL:0000037!9.91e-10!172;CL:0000566!9.91e-10!172;CL:0002031!4.02e-09!124;CL:0002032!6.13e-09!165;CL:0000837!6.13e-09!165;CL:0000084!1.58e-08!25;CL:0000827!1.58e-08!25;CL:0000838!3.91e-08!52;CL:0000542!1.01e-07!53;CL:0000051!1.01e-07!53;CL:0000219!1.26e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.43e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.02e-12,177;CL:0002087,1.16e-11,115;CL:0000134,2.76e-11,354;CL:0000738,5.40e-11,136;CL:0000037,8.65e-11,168;CL:0002320,1.50e-10,361;CL:0002032,3.45e-10,161;CL:0000837,3.45e-10,161;CL:0002031,4.51e-10,120;CL:0000838,1.10e-09,52;CL:0000542,2.33e-09,53;CL:0000051,2.33e-09,53;CL:0000084,3.82e-09,25;CL:0000827,3.82e-09,25;CL:0000219,4.84e-08,386;CL:0000860,3.03e-07,42;CL:0002057,3.03e-07,42;CL:0000034,6.58e-07,441;CL:0000791,8.03e-07,18;CL:0000789,8.03e-07,18;CL:0002420,8.03e-07,18;CL:0002419,8.03e-07,18;CL:0000790,8.03e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.99e-12!375;UBERON:0002390!8.29e-07!102;UBERON:0003061!8.29e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.81e-11,371;UBERON:0002390,5.38e-07,98;UBERON:0003061,5.38e-07,98 | |||
|phase1_expression=1.09007027562334,0,2.11431606143957,1.0007329835313,0.893922188854576,1.74467704820074,5.06599756336621,0,0,0.245733936501509,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0,1.45185470921107,1.64201178899891,1.57421562627358,0,3.0706351847777,0.77408061658038,0,0,0,1.08454080812422,0.710846162437108,4.11040615068786,2.76997704265939,3.40925560699241,1.73608696572681,0,0,0,0,0.377875943688809,0,0,0,0,4.31538588483226,2.81776777182011,8.51336027598907,0.344745680736619,1.29096936716765,2.70852973188684,0,0.272906150057846,0.449446968890169,2.75475503133812,0.641858054152187,1.91801137739712,5.93732340336089,4.58766412529753,4.26224750532694,1.7412554317715,0.56738522469114,1.24564449799115,4.27122730936464,3.12889751052121,8.03598725408932,0.605399502633369,2.20966581592539,3.16462387440884,0,0,0,0.112328631146495,0.300353785683013,0,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,5.28685314316103,6.72610275577843,3.16060901730092,2.75393678159366,1.57204305099666,1.02800749499755,7.52339229258051,1.62961133316795,0.473447805734733,0,9.91553066278045,1.76763544484902,2.21533894583621,3.24964636518019,4.22701355094728,7.67350150603282,2.63100647365882,3.86890024900188,5.506258628966,0.593146252648242,1.07016331235885,1.04535523804977,3.39928028092699,1.91610246800961,1.37450978193052,2.53019692019503,0.637130828648193,0.651083453856419,0.950452044448374,0.451725357233318,1.27986611154418,0,1.18388626022008,0,3.83052812126992,5.34880391567015,1.59306844271079,0,0,0.383587685530591,4.3372698286148,1.50401373190767,0.869079113764942,2.3858578411533,1.45990461090791,0,0,0,0.261958150995425,0,0,0.324547393654683,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0,0,0.625098097988558,0.22452937262617,0.225222960966644,0,0,0,5.27121669744253,3.87780264148325,0,2.98183171017191,1.2663051166458,0.662045904066094,0.573673241497627,0.354668382198357,0,0,0.24666754841716,1.24484414159907,0.134710672069688,0,0,0,0,0.312160076830321,0.570471821544449,0.896692083310806,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0.336672227908132,0,0.554128230968366,0.877955241761676,0.612975591598039,0.600952235626387,0.340296549480063,2.51145489964407,0.640672166455702,1.48352330811693,1.80054657650641,2.26715564324566,0.515281080091258,1.30281799432113,2.02531598689519,0.68205903612839,0.252433774244115,0.644349290496095,1.45481451136931,2.4850671476163,2.72030665214629,1.18692414617341,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.985326475791887,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.387815147273333,0,0.845302752556,0.531876233169741,2.08014873822732,0,0,0,0,0,0,1.95441710576241,0,0,4.82303003295338,3.48613383440118,3.39908170018994,0,0,0,0.239624855491583,1.14861935834114,0,0.723906533337896,0.410952645100767,0.895304816199478,4.59549090373462,5.12279976525011,6.03757209606648,2.95188983443421,0,0,0,0,0,0,0,1.24324654030811,0,0,0,2.28767947683888,1.96271887676878,0.946214490203608,0.819989904948992,0.300946099727719,0,0,0,0.184369168541703,0.260650843404249,0,0,1.03384013061444,0.862856803274467,0.960548020230999,0.303127571446259,0,0,0.992431231275107,0.767309866440312,0.280660094433074,3.20347873139252,1.53512174720011,3.05622450172854,0,0,0.710246901252508,0.739144404124282,0,0.232420756919918,0,0,0,0.459257792658427,0.364182336013434,0,0,0,0,0,0,1.13733384070897,0,0.431831832204279,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,3.21367859688319,0.096670718292122,0.770243085573222,0.307007349452259,0.551346289938122,0.429680979473094,0.290033387828457,0.170453254832202,0.178064071293475,0,0,0,0,0.464845549297286,0.31481234683064,0,0.308033580176089,0,0,0.55597265731176,0.429374660225974,0,0,0.38126038784765,0,0,0,0.78494864019923,0,0,0,0,0,0,0.48763373908959,1.70599442741899,1.05650146756755,0.682499557039929,0,2.26016233240486,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0,0,0,0.430234056612155,0.196498082026242,1.07001315444375,0.709522128141196,2.53329162357197,1.64647446479951,0,0,0,0,0,0.659006605437454,0,0,0,0,1.01489521846434,0.764637207142375,0,1.19115887728894,1.64544909234478,0,0,0,0,0,0,0,1.00988449083511,0.640276590135727,0.478278818186467,2.3949524571938,6.70268795463284,0.423347165447766,0,1.40398589056729,0.228234679033192,0.156679895773023,0,0.50787533340481,4.97823032821469,5.65039180134933,0,2.40453741329035,0.307240764308458,0.223676107892416,0,0.781552381608161,0,0,0,0.33307196799782,0,0,1.61158997199083,0,81.1307837540043,0,0.23874448473769,0.593929361665277,0,0.994147647766298,0.422008249231538,0,27.0278353731886,0,2.59022384726391,2.21027132424918,0,0,4.80030741298171,5.28767299025073,0,0,0.5115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| 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| ||
|short_description=p4@CMAHP | |||
}} | }} |
Latest revision as of 07:26, 17 September 2015
Short description: | p4@CMAHP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CMAHP_5end |
Coexpression cluster: | C818_adult_cord_hairy_anaplastic_mycosis_CD4_non |
Association with transcript: | 201bp_to_ENST00000462823_5end |
EntrezGene: | NA |
HGNC: | 2098 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.02e-12 | 177 |
nongranular leukocyte | 1.16e-11 | 115 |
mesenchymal cell | 2.76e-11 | 354 |
leukocyte | 5.40e-11 | 136 |
hematopoietic stem cell | 8.65e-11 | 168 |
connective tissue cell | 1.50e-10 | 361 |
hematopoietic oligopotent progenitor cell | 3.45e-10 | 161 |
hematopoietic multipotent progenitor cell | 3.45e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
lymphoid lineage restricted progenitor cell | 1.10e-09 | 52 |
lymphocyte | 2.33e-09 | 53 |
common lymphoid progenitor | 2.33e-09 | 53 |
T cell | 3.82e-09 | 25 |
pro-T cell | 3.82e-09 | 25 |
motile cell | 4.84e-08 | 386 |
classical monocyte | 3.03e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.03e-07 | 42 |
stem cell | 6.58e-07 | 441 |
mature alpha-beta T cell | 8.03e-07 | 18 |
alpha-beta T cell | 8.03e-07 | 18 |
immature T cell | 8.03e-07 | 18 |
mature T cell | 8.03e-07 | 18 |
immature alpha-beta T cell | 8.03e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.81e-11 | 371 |
hematopoietic system | 5.38e-07 | 98 |
blood island | 5.38e-07 | 98 |