FFCP PHASE1:Hg19::chr5:177580777..177580805,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55651 | |EntrezGene=55651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14377 | |HGNC=14377 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=79bp_to_ENST00000510363_5end | |association_with_transcript=79bp_to_ENST00000510363_5end | ||
|cluster_id=chr5:177580777..177580805,- | |||
|description=CAGE_peak_3_at_NHP2_5end | |description=CAGE_peak_3_at_NHP2_5end | ||
|id=chr5:177580777..177580805,- | |id=chr5:177580777..177580805,- | ||
|ontology_enrichment_celltype=CL:0002321!3.44e-11!248;CL:0000220!8.52e-11!246;CL:0000066!4.17e-10!254 | |ontology_enrichment_celltype=CL:0002321!3.44e-11!248;CL:0000220!8.52e-11!246;CL:0000066!4.17e-10!254 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.03e-09;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.73e-11,32;CL:0002321,6.87e-09,250;CL:0000192,4.74e-08,43;CL:0000514,4.74e-08,43;CL:0000393,1.50e-07,61;CL:0000211,1.50e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.91e-08!365;UBERON:0000483!1.46e-07!309;UBERON:0000119!3.55e-07!312;UBERON:0002100!8.48e-07!216 | |ontology_enrichment_uberon=UBERON:0000475!4.91e-08!365;UBERON:0000483!1.46e-07!309;UBERON:0000119!3.55e-07!312;UBERON:0002100!8.48e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;7.74e-09;42!UBERON:0003509;7.74e-09;42!UBERON:0004572;7.74e-09;42!UBERON:0004573;1.12e-07;33!UBERON:0004571;1.12e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.31e-11,42;UBERON:0003509,1.31e-11,42;UBERON:0004572,1.31e-11,42;UBERON:0004573,9.71e-09,33;UBERON:0004571,9.71e-09,33;UBERON:0007503,6.57e-08,78;UBERON:0007500,1.33e-07,59;UBERON:0001981,1.33e-07,59;UBERON:0004537,1.33e-07,59;UBERON:0006965,1.33e-07,59;UBERON:0000486,7.02e-07,83 | |||
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|phase1_expression=0.181678379270557,0.428201047781966,0.140954404095971,2.00146596706261,0.446961094427288,0,0,0.631719873426831,0.783556884599516,1.96587149201207,3.48900583986214,0,0.527533956456907,0.123766352960047,0.662794751455832,1.34465029290355,2.41077811209591,1.46062018077475,0.487932798790507,0.246242116153576,1.02000345622126,1.56727360739044,0,0.273748850145768,0.125542639594803,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,3.67768489791571,1.204823675113,0.739508020333575,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0.443067789167242,0,0,0.130059347559878,0,0,0.289803085735052,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0.255725123687061,0.722878304769133,0.50133791063589,0.869079113764942,0,0,0.472674085820339,1.10864698731282,0.790513071238134,0.327447688744282,0.364295288292542,1.11235332835329,0.324547393654683,0.348259474598534,0.398873881556595,0,0.571994910780128,0,0.39752481473341,0,1.04142150482278,0,1.25849830862972,0,1.04497483268405,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0.732186172644509,1.10298924103761,0.81014194788176,0.17859945656816,0.44905874525234,0.675668882899933,0,0.949265659568129,1.09921046358244,0,0,0.872188104285069,0,0.12663051166458,0.264818361626438,0.573673241497627,0.709336764396714,0.560677600142307,0,0.49333509683432,0,0.538842688278752,0.653847612453835,0.302714855289863,0.576175924479999,0.468642863667593,0.624320153660641,2.2818872861778,0.896692083310806,0.587172493218824,0.485618833104395,0.421352420106746,0,0.368502951935304,0.206651562351531,0,0.741800787835671,0,0,0,0.375355559615893,0.277064115484183,0.877955241761676,0.30648779579902,0.45071417671979,0.453728732640084,0.358779271377724,0,0.211931901159562,0,0.412210116953756,0,0.558350568994769,0.168776332241266,0.194874010322397,0,0.0920498986422993,0.161646056818812,0,0.806016785821122,0.339121184620975,2.51239109112286,1.36373060295417,1.14721838155602,0.731842236777572,0.795178609928912,0.464775771478074,0.518305275076852,0.504641701751257,1.09493207722749,3.12899064659632,0,0,0,0,0.591534000199219,1.01150814046861,0.723033089650446,0.992645754591546,0.871517776369625,0.71181185733329,2.56179485504312,1.76599318612811,1.53898862778556,0,0,0,0,0,0,0.590789906681404,0,0,0.686271241194102,0.98775256867763,0,0.402115889646523,0.277765335475589,0.651616610620649,1.03993478527958,0,0,0.587043471179108,0.577465791044295,0.462985512576611,0.190254152234598,6.3216351836742,4.29243081047436,0,0.468008530278475,0.594524649154913,2.81201501960331,0.335964256397719,0.850650583454319,0.447792613514241,1.16253575405585,1.91691339582606,0,0,0.621984346622316,0,0,0.380987365753014,0,0,0,0.102827492703324,1.20137223137567,0.285826432630578,0,0,0.2933531432838,0.129271715757778,0,2.535908257668,0.531876233169741,0,0.257207374262142,0,0.799266537048298,0.142977993658148,0.542621605391443,0.823240336780769,0.977208552881205,0.355391948742546,0.791951872933429,0,0.871533458600294,0.499864955910285,0,0,0,1.4377491329495,0,0,1.01346914667305,0.821905290201534,0,0,0,0,0,0.254094624222463,0,0,0,1.27587750330633,0,0,0,0.12269149171914,1.00034104211935,0.271265023699736,0.415941723061614,0.892144943985809,0.157702415033935,0.234282829985426,0.300946099727719,0,1.03473071292505,0,1.47495334833363,0.434418072340414,0.195801157462741,2.05886054286514,0.206768026122887,0,0,0.303127571446259,0,0.30239029332968,0.992431231275107,0,1.40330047216537,0.384417447767103,0,0.804269605718038,0,0.771048469013278,0.887808626565635,0.492762936082855,1.03850885836724,2.20799719073923,0.120859449591622,1.20303882181971,0.552485933615378,0.803701137152247,0.364182336013434,0.393373244878272,0.902399225814824,0.385076685522074,0.784349769176855,0,0.211103257785751,0,1.87103075804167,0.431831832204279,1.54227252690289,0.812839312631559,1.50506932156456,0.509752546090077,2.49322802678617,0.895499018888713,0,0,0,0.656029291399411,0,0.103041011647722,0.183138929636687,0.330037999682352,0.574265537996172,1.95018073810956,0,0.386682873168488,0.616194468458578,0.767518373630648,1.24052915236078,0,0,0.511359764496605,0.534192213880424,1.65284915360978,1.34533047155574,0.255225424989168,0.50578890427775,3.71876439437829,0,0.6970372701606,0.924100740528266,1.59691809095107,0,1.29726953372744,1.00187420719394,0.372158369359667,0.316379424718726,0.190630193923825,0.511795582622668,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.706874414074119,0.404364963146632,1.58510321173008,2.10629228119491,1.95053495635836,1.46228093778771,0,0.9554993798559,0.565621727814851,0,2.2054613741845,1.99031692572366,3.5076070820301,0,0,1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| ||
|short_description=p3@NHP2 | |short_description=p3@NHP2 | ||
}} | }} |
Latest revision as of 07:33, 17 September 2015
Short description: | p3@NHP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NHP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 79bp_to_ENST00000510363_5end |
EntrezGene: | NHP2 |
HGNC: | 14377 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.73e-11 | 32 |
embryonic cell | 6.87e-09 | 250 |
smooth muscle cell | 4.74e-08 | 43 |
smooth muscle myoblast | 4.74e-08 | 43 |
electrically responsive cell | 1.50e-07 | 61 |
electrically active cell | 1.50e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
artery | 1.31e-11 | 42 |
arterial blood vessel | 1.31e-11 | 42 |
arterial system | 1.31e-11 | 42 |
systemic artery | 9.71e-09 | 33 |
systemic arterial system | 9.71e-09 | 33 |
epithelial vesicle | 6.57e-08 | 78 |
epithelial tube open at both ends | 1.33e-07 | 59 |
blood vessel | 1.33e-07 | 59 |
blood vasculature | 1.33e-07 | 59 |
vascular cord | 1.33e-07 | 59 |
multilaminar epithelium | 7.02e-07 | 83 |