FFCP PHASE1:Hg19::chr19:3557773..3557778,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=126321 | |EntrezGene=126321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28299 | |HGNC=28299 | ||
|TSSclassifier=strong | |||
|UniProt=Q6NUT3,E9PAJ8,A8MXP7 | |UniProt=Q6NUT3,E9PAJ8,A8MXP7 | ||
|association_with_transcript=-202bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | |association_with_transcript=-202bp_to_ENST00000355415,ENST00000389395,ENST00000398558,NM_001042680,NM_021731,NM_174983,uc002lxw.2,uc002lxx.2,uc002lxz.2_5end | ||
|cluster_id=chr19:3557773..3557778,- | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_13_at_MFSD12_5end | |description=CAGE_peak_13_at_MFSD12_5end | ||
|id=chr19:3557773..3557778,- | |id=chr19:3557773..3557778,- | ||
|ontology_enrichment_celltype=CL:0000148!1.19e-31!10;CL:0000541!1.19e-31!10;CL:0000147!1.24e-22!14;CL:0002150!2.71e-17!3;CL:0000861!2.71e-17!3;CL:0000710!7.51e-16!20;CL:0002566!3.98e-14!1;CL:0000075!9.86e-12!27;CL:0000235!1.09e-11!10;CL:0002077!1.38e-09!33;CL:0000325!4.28e-08!39;CL:0002600!1.12e-07!2;CL:0000333!2.49e-07!41 | |ontology_enrichment_celltype=CL:0000148!1.19e-31!10;CL:0000541!1.19e-31!10;CL:0000147!1.24e-22!14;CL:0002150!2.71e-17!3;CL:0000861!2.71e-17!3;CL:0000710!7.51e-16!20;CL:0002566!3.98e-14!1;CL:0000075!9.86e-12!27;CL:0000235!1.09e-11!10;CL:0002077!1.38e-09!33;CL:0000325!4.28e-08!39;CL:0002600!1.12e-07!2;CL:0000333!2.49e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0002566;3.34e-66;1!CL:0000148;1.10e-59;10!CL:0000147;4.85e-43;14!CL:0000710;1.56e-30;20!CL:0002567;3.66e-23;3!CL:0000075;5.98e-23;27!CL:0002077;1.96e-16;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,4.66e-66,1;CL:0000148,1.10e-59,10;CL:0000541,1.10e-59,10;CL:0000147,4.85e-43,14;CL:0000710,1.56e-30,20;CL:0002567,3.27e-23,3;CL:0000075,5.98e-23,27;CL:0002077,1.78e-18,34;CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.66e-07;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!7.46e-34!9;UBERON:0001557!4.42e-16!19;UBERON:0008947!2.31e-11!38;UBERON:0003258!2.31e-11!38;UBERON:0000072!2.50e-09!46;UBERON:0000065!4.75e-08!53 | |ontology_enrichment_uberon=UBERON:0001737!7.46e-34!9;UBERON:0001557!4.42e-16!19;UBERON:0008947!2.31e-11!38;UBERON:0003258!2.31e-11!38;UBERON:0000072!2.50e-09!46;UBERON:0000065!4.75e-08!53 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p13@MFSD12 | |short_description=p13@MFSD12 | ||
}} | }} |
Latest revision as of 09:42, 17 September 2015
Short description: | p13@MFSD12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MFSD12_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -202bp_to_ENST00000355415, ENST00000389395, ENST00000398558, NM_001042680, NM_021731, NM_174983, uc002lxw.2, uc002lxx.2, uc002lxz.2_5end |
EntrezGene: | MFSD12 |
HGNC: | 28299 |
UniProt: | Q6NUT3E9PAJ8A8MXP7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 4.66e-66 | 1 |
melanocyte | 1.10e-59 | 10 |
melanoblast | 1.10e-59 | 10 |
pigment cell | 4.85e-43 | 14 |
neurecto-epithelial cell | 1.56e-30 | 20 |
light melanocyte | 3.27e-23 | 3 |
columnar/cuboidal epithelial cell | 5.98e-23 | 27 |
ecto-epithelial cell | 1.78e-18 | 34 |
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |