FFCP PHASE1:Hg19::chr11:2291849..2291858,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=430 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=739 | |||
|TSSclassifier=strong | |||
|UniProt=Q99929 | |||
|association_with_transcript=323bp_to_ENST00000331289,NM_005170,uc001lvu.2_5end | |||
|cluster_id=chr11:2291849..2291858,- | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_4_at_ASCL2_5end | |||
|id=chr11:2291849..2291858,- | |||
|ontology_enrichment_celltype=CL:0002393!3.08e-13!9;CL:0002397!3.08e-13!9;CL:0000623!6.10e-12!3;CL:0000825!6.10e-12!3;CL:0002541!1.98e-11!3;CL:0000875!5.63e-11!3;CL:0002396!5.63e-11!3;CL:0002057!4.71e-09!42;CL:0000860!2.76e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0002535;7.67e-18;2!CL:0000623;3.06e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,6.48e-18,2;CL:0000623,3.24e-12,3;CL:0000825,3.24e-12,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;3.61e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.63e-09;4!DOID:1612;1.63e-09;4!DOID:4362;6.13e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.57e-09,4;DOID:1612,1.57e-09,4;DOID:4362,5.73e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.98e-11!3;UBERON:0000920!1.98e-11!3;UBERON:0005631!2.48e-11!14;UBERON:0000158!2.48e-11!14;UBERON:0003124!3.79e-08!7;UBERON:0000478!3.80e-08!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;7.67e-18;2!UBERON:0004801;7.67e-18;2!UBERON:0000002;8.02e-07;6!UBERON:0001560;8.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,6.48e-18,2;UBERON:0004801,6.48e-18,2;UBERON:0000002,7.58e-07,6;UBERON:0001560,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767658796194425,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0.112328631146495,0.150176892841506,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,1.50939302401662,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0,0,0,2.51932747854276,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,1.5625665665114,0,0,0.227586896570999,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0.23056390438806,0.538545866458633,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0,0,0,0,17.1097666638777,0,0.45178432815584,0,0,0.385870790539723,0.437119121007915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.631086248772738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,2.34640942403454,0,0.406896178315738,0,0,0 | |||
|short_description=p4@ASCL2 | |||
}} |
Latest revision as of 10:00, 17 September 2015
Short description: | p4@ASCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ASCL2_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 323bp_to_ENST00000331289, NM_005170, uc001lvu.2_5end |
EntrezGene: | ASCL2 |
HGNC: | 739 |
UniProt: | Q99929 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 6.48e-18 | 2 |
natural killer cell | 3.24e-12 | 3 |
pro-NK cell | 3.24e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 6.48e-18 | 2 |
cervix epithelium | 6.48e-18 | 2 |
uterine cervix | 7.58e-07 | 6 |
neck of organ | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.57e-09 | 4 |
breast cancer | 1.57e-09 | 4 |
cervical cancer | 5.73e-08 | 5 |