FFCP PHASE1:Hg19::chr15:40544772..40544782,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56924 | |EntrezGene=56924 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16061 | |HGNC=16061 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000560684_5end | |association_with_transcript=20bp_to_ENST00000560684_5end | ||
|cluster_id=chr15:40544772..40544782,+ | |||
|description=CAGE_peak_17_at_PAK6_5end | |description=CAGE_peak_17_at_PAK6_5end | ||
|id=chr15:40544772..40544782,+ | |id=chr15:40544772..40544782,+ | ||
|ontology_enrichment_celltype=CL:0000039!9.40e-09!7;CL:0000586!9.40e-09!7;CL:0002076!1.49e-08!43;CL:0002322!2.40e-08!5;CL:0000066!6.53e-08!254;CL:0000223!3.83e-07!59 | |ontology_enrichment_celltype=CL:0000039!9.40e-09!7;CL:0000586!9.40e-09!7;CL:0002076!1.49e-08!43;CL:0002322!2.40e-08!5;CL:0000066!6.53e-08!254;CL:0000223!3.83e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1001319;5.16e-21;1!CL:1000600;5.16e-21;1!CL:0000039;1.64e-12;7!CL:0000586;1.64e-12;7!CL:0000123;3.34e-11;2!CL:0000242;3.34e-11;2!CL:0002178;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,5.16e-21,1;CL:1000600,5.16e-21,1;CL:0000039,1.59e-12,7;CL:0000586,1.59e-12,7;CL:0000242,3.02e-11,2;CL:0002178,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.78e-08;3 | |||
|ontology_enrichment_disease=DOID:305!1.35e-12!106;DOID:0050687!6.30e-09!143 | |ontology_enrichment_disease=DOID:305!1.35e-12!106;DOID:0050687!6.30e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:1799;2.08e-21;1!DOID:10165;2.08e-21;1!DOID:1798;2.08e-21;1!DOID:3493;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.30e-21,1;DOID:10165,2.30e-21,1;DOID:1798,2.30e-21,1;DOID:3493,4.09e-11,2;DOID:0050687,1.50e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002294!4.13e-08!7;UBERON:0001173!4.13e-08!7;UBERON:0004912!4.13e-08!7;UBERON:0004119!7.73e-08!169;UBERON:0000925!7.73e-08!169;UBERON:0006595!7.73e-08!169;UBERON:0005911!1.12e-07!82;UBERON:0000473!3.90e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;5.16e-21;1!UBERON:0001256;5.16e-21;1!UBERON:0001259;5.16e-21;1!UBERON:0001255;3.34e-11;2!UBERON:0001905;3.34e-11;2!UBERON:0002757;3.34e-11;2!UBERON:0010134;3.34e-11;2!UBERON:0005408;3.34e-11;2!UBERON:0001556;3.34e-11;2!UBERON:0001899;3.34e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,5.16e-21,1;UBERON:0001256,5.16e-21,1;UBERON:0001259,5.16e-21,1;UBERON:0001255,3.35e-11,2;UBERON:0001556,3.35e-11,2;UBERON:0001905,4.52e-11,2;UBERON:0002757,4.52e-11,2;UBERON:0010134,4.52e-11,2;UBERON:0005408,4.52e-11,2;UBERON:0001899,4.52e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0.243947412259191,0.795178609928912,0.69716365721711,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,1.43216939740487,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0.221158519862449,1.18219047581419,0,0,0,0.0769502585037971,0,2.3056390438806,0,3.36806852958225,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.576361668616424,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.482259445395058,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.707818340086442,0,0,0,0,0,0,0,0,2.09525355585138,0,0.295712172434091,0,0,0,0,0,0.548257766857182,0,0,0,1.07140367175657,0,0,0.227662191351298,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.17780280338292,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0.5647304101948,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.509944148709909,0,0.18378979906969,0.250707539292375,0.151557396436479,0.803892390468535,0,0,0.213233981900981,0.23806443146374,0,0,0,0.318235791390825,0.404234377916439,0,0,0,0.0717222053926763,0,1.22104902916462,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0,0.286804595389004,0.243947412259191,0.795178609928912,0.69716365721711,0,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0.359473404589307,1.43216939740487,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0.221158519862449,1.18219047581419,0,0,0,0.0769502585037971,0,2.3056390438806,0,3.36806852958225,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34823682632161,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.576361668616424,0,0,0,0,1.41416420770077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0.223171457441873,0,0,0,0,0,0,0.0984274815147488,0,0,0,0.482259445395058,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,1.40500471742064,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845248493434508,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0.707818340086442,0,0,0,0,0,0,0,0,2.09525355585138,0,0.295712172434091,0,0,0,0,0,0.548257766857182,0,0,0,1.07140367175657,0,0,0.227662191351298,0.177404740325278,0.115233987555779,0,0.0679697329768317,0,0.118193840883968,0,0.156986185701028,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,1.17780280338292,0.121917924982269,0,0,0,0,0.233939463462106,0.198950775161368,0,0.5647304101948,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0.509944148709909,0,0.18378979906969,0.250707539292375,0.151557396436479,0.803892390468535,0,0,0.213233981900981,0.23806443146374,0,0,0,0.318235791390825,0.404234377916439,0,0,0,0.0717222053926763,0,1.22104902916462,0.106727345877715,0,0,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p17@PAK6 | |short_description=p17@PAK6 | ||
}} | }} |
Latest revision as of 12:51, 17 September 2015
Short description: | p17@PAK6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_PAK6_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_ENST00000560684_5end |
EntrezGene: | PAK6 |
HGNC: | 16061 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 5.16e-21 | 1 |
lower urinary tract cell | 5.16e-21 | 1 |
germ line cell | 1.59e-12 | 7 |
germ cell | 1.59e-12 | 7 |
Merkel cell | 3.02e-11 | 2 |
epithelial cell of stomach | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 5.16e-21 | 1 |
wall of urinary bladder | 5.16e-21 | 1 |
mucosa of urinary bladder | 5.16e-21 | 1 |
urinary bladder | 3.35e-11 | 2 |
lower urinary tract | 3.35e-11 | 2 |
pineal body | 4.52e-11 | 2 |
regional part of epithalamus | 4.52e-11 | 2 |
secretory circumventricular organ | 4.52e-11 | 2 |
circumventricular organ | 4.52e-11 | 2 |
epithalamus | 4.52e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.30e-21 | 1 |
endocrine pancreas cancer | 2.30e-21 | 1 |
pancreatic endocrine carcinoma | 2.30e-21 | 1 |
signet ring cell adenocarcinoma | 4.09e-11 | 2 |
cell type cancer | 1.50e-08 | 143 |