FFCP PHASE1:Hg19::chr1:31886750..31886762,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347735 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23231 | |||
|TSSclassifier=strong | |||
|UniProt=B4DJK5,Q96IM8,Q96SA4,B7ZAP2 | |||
|association_with_transcript=90bp_to_ENST00000491976,ENST00000536384,NM_001199039,NM_018565,uc010ogh.1_5end | |||
|cluster_id=chr1:31886750..31886762,+ | |||
|description=CAGE_peak_8_at_SERINC2_5end | |||
|id=chr1:31886750..31886762,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.08e-12!43;CL:0000066!5.34e-12!254;CL:0000223!9.61e-12!59;CL:0002251!1.31e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0000622;1.54e-12;5!CL:0000154;1.55e-10;6!CL:0002623;8.18e-10;3!CL:0000150;3.53e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000622,2.08e-12,5;CL:0000154,1.99e-10,6;CL:0002623,9.81e-10,3;CL:0000150,4.16e-07,9;CL:0002076,8.79e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.58e-08;1!UBERON:0005754;5.58e-08;1 | |||
|ontology_enrichment_disease=DOID:1749!2.77e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.37e-18!169;UBERON:0000925!2.37e-18!169;UBERON:0006595!2.37e-18!169;UBERON:0001007!1.29e-14!155;UBERON:0001555!1.29e-14!155;UBERON:0007026!1.29e-14!155;UBERON:0000161!5.42e-14!35;UBERON:0000165!2.37e-13!28;UBERON:0000930!2.37e-13!28;UBERON:0001444!2.01e-12!48;UBERON:0000475!9.64e-12!365;UBERON:0000166!2.22e-11!21;UBERON:0003102!6.30e-11!95;UBERON:0001004!3.18e-10!72;UBERON:0004921!3.98e-09!129;UBERON:0004185!3.98e-09!129;UBERON:0000481!7.13e-09!347;UBERON:0002100!7.39e-09!216;UBERON:0003104!7.72e-08!238;UBERON:0009142!7.72e-08!238;UBERON:0000344!4.20e-07!12;UBERON:0000077!5.07e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.58e-08;1!UBERON:0007195;5.58e-08;1!UBERON:0006868;5.58e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,3.34e-08,1;UBERON:0006868,3.34e-08,1;UBERON:0007195,7.59e-08,1 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0.446961094427288,0,2.53299878168311,0,0,0,0.697801167972428,0,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,1.52054421143703,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0.624320153660641,0,0.149448680551801,0.469737994575059,0,0,0.408308342509787,0.491337269247072,0.206651562351531,0,0,0,0,0.168336113954066,0.125118519871964,0.277064115484183,1.31693286264251,0,0,0,0,0,0,0,0.103052529238439,0.257640540045629,0,1.0126579934476,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0.573609190778008,0,0,0.116193942869518,0,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0.171567810298526,0,2.24803506515239,0.100528972411631,0.648119116109707,0.651616610620649,0,0,0,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0.93733833986777,0,0.141775097242386,1.88072897675981,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0.799266537048298,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0,0.173767228936166,0.195801157462741,1.71571711905428,0,0,0,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.640695746278505,0,0.482561763430822,0,0,0,0,0,0.232420756919918,0,0.40101294060657,0.552485933615378,0.459257792658427,0.364182336013434,0.262248829918848,0.902399225814824,0.231046011313244,0,0,0.316654886678627,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0.721287081534056,0,0,1.14853107599234,0,0,0.193341436584244,0,0.460511024178389,0.275673144969061,0,0,0.340906509664404,1.33548053470106,0.991709492165869,1.15314040419064,0.255225424989168,1.0115778085555,0,0,0,0,0,0.869932992075073,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0.349934720244983,0.384888450902048,0.670302275535787,1.08890984861323,0.282431402330337,0.43050537267123,0,1.33029046061003,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0.921482106297696,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.179736702294654,0,0,0,0,1.11136990144637,0,0,0,0,0.349839999984783,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.32681539055697,0,0,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.176915129006678,2.4441205797345,0,0,0,0,0.802577647298789,0,0,0.586993856796269,0,0.789168805698781,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0.979923974143776,0.609414446062818,0.698906672968121,0,0,0,0,0.193978032976839,0,0,0,0.397429223405979,0,0,0,1.06726497369676,0,0,0,0,0.720273989940749,0,1.17847017308398,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.157611414598396,0.104909176269996,0,0,2.87872795979168,0,0,0,0,0,0,0,0,0,0,0.879313402068495,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.624902039810533,0,0,0.235265819698172,0,0,0,0.467426619694449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,1.07962490351128,0.235939446695481,0.366857197043358,0.808679663052368,0,0,0,0.0752103283492573,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,1.27762427639595,0,0,0,0,0,0,0,0,0,0,0,0.235479278551542,0,0.280272163313789,0,0,0.47775168788705,0,0,0,0.173858272302579,0,1.03608082081518,0.3414369541879,1.38251932362818,0.860454717640555,0.354996002191696,0.0852134047591577,1.69354820076372,0,0,0,0,0.490751168076215,0,0,1.33461648913121,3.4794432940146,0,0,0.198950775161368,0,0,0,0.301925687133347,0.385870790539723,0.437119121007915,0,0.245148321753905,0,0,0,0,0.169927114687817,0,0,0,0.535661815816973,2.82315897372553,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.639701945702943,0.23806443146374,0.0645889098360061,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0,0.732629417498771,0,0,0.269475606319761,0,0,0,0,0,0 | |||
|short_description=p8@SERINC2 | |||
}} |
Latest revision as of 13:14, 17 September 2015
Short description: | p8@SERINC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SERINC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 90bp_to_ENST00000491976, ENST00000536384, NM_001199039, NM_018565, uc010ogh.1_5end |
EntrezGene: | SERINC2 |
HGNC: | 23231 |
UniProt: | B4DJK5Q96IM8Q96SA4B7ZAP2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell | 2.08e-12 | 5 |
protein secreting cell | 1.99e-10 | 6 |
acinar cell of salivary gland | 9.81e-10 | 3 |
glandular epithelial cell | 4.16e-07 | 9 |
endo-epithelial cell | 8.79e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 3.34e-08 | 1 |
seminal fluid secreting gland | 3.34e-08 | 1 |
stroma of bone marrow | 7.59e-08 | 1 |