FFCP PHASE1:Hg19::chr16:68678879..68678886,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1001 | |EntrezGene=1001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1762 | |HGNC=1762 | ||
|TSSclassifier=strong | |||
|UniProt=P22223 | |UniProt=P22223 | ||
|association_with_transcript=140bp_to_ENST00000264012_5end | |association_with_transcript=140bp_to_ENST00000264012_5end | ||
|cluster_id=chr16:68678879..68678886,+ | |||
|coexpression_cluster_id=C88 | |coexpression_cluster_id=C88 | ||
|description=CAGE_peak_10_at_CDH3_5end | |description=CAGE_peak_10_at_CDH3_5end | ||
|id=chr16:68678879..68678886,+ | |id=chr16:68678879..68678886,+ | ||
|ontology_enrichment_celltype=CL:0000148!1.13e-30!10;CL:0000541!1.13e-30!10;CL:0000147!1.15e-21!14;CL:0002567!4.20e-20!3;CL:0000075!1.91e-17!27;CL:0000710!6.71e-15!20;CL:0002077!2.93e-11!33;CL:0000325!3.12e-09!39;CL:0000333!2.52e-08!41;CL:0002566!7.50e-08!1 | |ontology_enrichment_celltype=CL:0000148!1.13e-30!10;CL:0000541!1.13e-30!10;CL:0000147!1.15e-21!14;CL:0002567!4.20e-20!3;CL:0000075!1.91e-17!27;CL:0000710!6.71e-15!20;CL:0002077!2.93e-11!33;CL:0000325!3.12e-09!39;CL:0000333!2.52e-08!41;CL:0002566!7.50e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.55e-98;3!CL:0000148;7.03e-82;10!CL:0000147;9.79e-59;14!CL:0000710;2.35e-41;20!CL:0002566;5.97e-34;1!CL:0000075;8.03e-31;27!CL:0002077;2.74e-20;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.55e-98,3;CL:0000148,7.04e-82,10;CL:0000541,7.04e-82,10;CL:0000147,9.79e-59,14;CL:0000710,2.35e-41,20;CL:0002566,3.61e-34,1;CL:0000075,8.03e-31,27;CL:0002077,1.30e-24,34;CL:0000333,1.37e-19,41;CL:0000133,5.71e-14,59;CL:0000221,1.34e-11,72 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.58e-34;1!CL:0000133;3.63e-09;59 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000989!1.18e-07!1;UBERON:0008811!1.18e-07!1;UBERON:0006258!1.18e-07!1;UBERON:0005876!1.18e-07!1;UBERON:0004874!1.18e-07!1;UBERON:0002363!1.83e-07!1;UBERON:0007647!1.83e-07!1;UBERON:0010115!1.83e-07!1;UBERON:0000997!3.84e-07!1;UBERON:0005056!3.84e-07!1;UBERON:0002902!4.61e-07!1;UBERON:0009899!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1 | |ontology_enrichment_uberon=UBERON:0000989!1.18e-07!1;UBERON:0008811!1.18e-07!1;UBERON:0006258!1.18e-07!1;UBERON:0005876!1.18e-07!1;UBERON:0004874!1.18e-07!1;UBERON:0002363!1.83e-07!1;UBERON:0007647!1.83e-07!1;UBERON:0010115!1.83e-07!1;UBERON:0000997!3.84e-07!1;UBERON:0005056!3.84e-07!1;UBERON:0002902!4.61e-07!1;UBERON:0009899!4.61e-07!1;UBERON:0001882!4.90e-07!1;UBERON:0005403!4.90e-07!1 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p10@CDH3 | |short_description=p10@CDH3 | ||
}} | }} |
Latest revision as of 13:57, 17 September 2015
Short description: | p10@CDH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_CDH3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 140bp_to_ENST00000264012_5end |
EntrezGene: | CDH3 |
HGNC: | 1762 |
UniProt: | P22223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.55e-98 | 3 |
melanocyte | 7.04e-82 | 10 |
melanoblast | 7.04e-82 | 10 |
pigment cell | 9.79e-59 | 14 |
neurecto-epithelial cell | 2.35e-41 | 20 |
dark melanocyte | 3.61e-34 | 1 |
columnar/cuboidal epithelial cell | 8.03e-31 | 27 |
ecto-epithelial cell | 1.30e-24 | 34 |
migratory neural crest cell | 1.37e-19 | 41 |
neurectodermal cell | 5.71e-14 | 59 |
ectodermal cell | 1.34e-11 | 72 |