FFCP PHASE1:Hg19::chr5:2752258..2752267,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=153571 | |EntrezGene=153571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24226 | |HGNC=24226 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SI9 | |UniProt=Q86SI9 | ||
|association_with_transcript=0bp_to_ENST00000334000,ENST00000397835,NM_178569,uc003jdc.2,uc011cmg.1,uc011cmh.1,uc011cmi.1,uc011cmj.1_5end | |association_with_transcript=0bp_to_ENST00000334000,ENST00000397835,NM_178569,uc003jdc.2,uc011cmg.1,uc011cmh.1,uc011cmi.1,uc011cmj.1_5end | ||
|cluster_id=chr5:2752258..2752267,+ | |||
|description=CAGE_peak_10_at_C5orf38_5end | |description=CAGE_peak_10_at_C5orf38_5end | ||
|id=chr5:2752258..2752267,+ | |id=chr5:2752258..2752267,+ | ||
|ontology_enrichment_celltype=CL:0002251!5.21e-09!21;CL:0002076!1.01e-08!43;CL:0000066!2.31e-07!254;CL:0002551!5.05e-07!6;CL:0002252!9.83e-07!2 | |ontology_enrichment_celltype=CL:0002251!5.21e-09!21;CL:0002076!1.01e-08!43;CL:0000066!2.31e-07!254;CL:0002551!5.05e-07!6;CL:0002252!9.83e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002623;2.45e-12;3!CL:0000083;1.38e-09;4!CL:0000622;6.33e-08;5!CL:0002251;1.33e-07;20!CL:0000154;8.25e-07;6!CL:0002569;8.25e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.07e-12,3;CL:0000083,1.70e-09,4;CL:0000622,5.73e-08,5;CL:0002251,1.29e-07,20;CL:0000154,7.58e-07,6;CL:0002569,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008814;8.34e-18;2!UBERON:0010056;8.34e-18;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;4.27e-34;1!DOID:10165;4.27e-34;1!DOID:1798;4.27e-34;1!DOID:4556;2.45e-12;3!DOID:1749;1.90e-10;14!DOID:1793;1.38e-09;4!DOID:3908;6.33e-08;5!DOID:170;8.25e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.85e-34,1;DOID:10165,9.85e-34,1;DOID:1798,9.85e-34,1;DOID:4556,2.31e-12,3;DOID:1749,1.90e-10,14;DOID:1793,1.70e-09,4;DOID:3908,6.13e-08,5;DOID:170,9.49e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!4.07e-14!14;UBERON:0000158!4.07e-14!14;UBERON:0004923!1.46e-10!57;UBERON:0000305!1.83e-09!7;UBERON:0000478!2.22e-09!24;UBERON:0004871!3.16e-08!8;UBERON:0002067!4.29e-07!9;UBERON:0004016!4.29e-07!9;UBERON:0010083!4.29e-07!9;UBERON:0003343!7.68e-07!4;UBERON:0004785!7.68e-07!4 | |ontology_enrichment_uberon=UBERON:0005631!4.07e-14!14;UBERON:0000158!4.07e-14!14;UBERON:0004923!1.46e-10!57;UBERON:0000305!1.83e-09!7;UBERON:0000478!2.22e-09!24;UBERON:0004871!3.16e-08!8;UBERON:0002067!4.29e-07!9;UBERON:0004016!4.29e-07!9;UBERON:0010083!4.29e-07!9;UBERON:0003343!7.68e-07!4;UBERON:0004785!7.68e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.45e-12;3!UBERON:0001033;2.45e-12;3!UBERON:0003343;1.38e-09;4!UBERON:0004785;1.38e-09;4!UBERON:0000161;5.93e-08;19!UBERON:0000166;5.93e-08;19!UBERON:0001044;8.25e-07;6!UBERON:0000974;8.25e-07;6!UBERON:0003293;8.25e-07;6!UBERON:0003294;8.25e-07;6!UBERON:0010047;8.25e-07;6!UBERON:0003408;8.25e-07;6!UBERON:0003422;8.25e-07;6!UBERON:0000167;8.25e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.59e-12,3;UBERON:0001033,2.59e-12,3;UBERON:0010056,2.59e-12,3;UBERON:0003343,1.44e-09,4;UBERON:0004785,1.44e-09,4;UBERON:0000166,5.24e-07,22;UBERON:0001044,7.58e-07,6;UBERON:0003293,7.58e-07,6;UBERON:0003294,7.58e-07,6;UBERON:0010047,7.58e-07,6;UBERON:0000167,7.58e-07,6;UBERON:0003422,8.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.359030577639089,1.95565269459615,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.157363764404994,0,0.896436696664224,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.183428598521679,1.15525666150338,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0.252320850875628,0,0,0.643240938192885,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0.858486162094873,0,0,0,0.93733833986777,0,0.141775097242386,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.909382714338778,0,0.30239029332968,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,0.359030577639089,1.95565269459615,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.0788057072991982,0.157363764404994,0,0.896436696664224,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0.588886311006154,0,0.183428598521679,1.15525666150338,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356760272332706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0.327796715891087,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@C5orf38 | |short_description=p10@C5orf38 | ||
}} | }} |
Latest revision as of 14:07, 17 September 2015
Short description: | p10@C5orf38 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_C5orf38_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000334000, ENST00000397835, NM_178569, uc003jdc.2, uc011cmg.1, uc011cmh.1, uc011cmi.1, uc011cmj.1_5end |
EntrezGene: | C5orf38 |
HGNC: | 24226 |
UniProt: | Q86SI9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.07e-12 | 3 |
epithelial cell of pancreas | 1.70e-09 | 4 |
acinar cell | 5.73e-08 | 5 |
epithelial cell of alimentary canal | 1.29e-07 | 20 |
protein secreting cell | 7.58e-07 | 6 |
mesenchymal stem cell of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tongue | 2.59e-12 | 3 |
gustatory system | 2.59e-12 | 3 |
future tongue | 2.59e-12 | 3 |
mucosa of oral region | 1.44e-09 | 4 |
respiratory system mucosa | 1.44e-09 | 4 |
oral opening | 5.24e-07 | 22 |
saliva-secreting gland | 7.58e-07 | 6 |
gland of oral region | 7.58e-07 | 6 |
gland of foregut | 7.58e-07 | 6 |
oral gland | 7.58e-07 | 6 |
oral cavity | 7.58e-07 | 6 |
mesenchyme of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.85e-34 | 1 |
endocrine pancreas cancer | 9.85e-34 | 1 |
pancreatic endocrine carcinoma | 9.85e-34 | 1 |
lung large cell carcinoma | 2.31e-12 | 3 |
squamous cell carcinoma | 1.90e-10 | 14 |
pancreatic cancer | 1.70e-09 | 4 |
non-small cell lung carcinoma | 6.13e-08 | 5 |
endocrine gland cancer | 9.49e-07 | 6 |