FFCP PHASE1:Hg19::chr11:33280082..33280093,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:33280082..33280093,+ to FFCP PHASE1:Hg19::chr11:33280082..33280093,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10114 | |EntrezGene=10114 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4915 | |HGNC=4915 | ||
|TSSclassifier=strong | |||
|UniProt=E9PKD7 | |UniProt=E9PKD7 | ||
|association_with_transcript=205bp_to_ENST00000456517,ENST00000531504,uc009yjv.1_5end | |||
|cluster_id=chr11:33280082..33280093,+ | |||
|description=CAGE_peak_12_at_HIPK3_5end | |||
|id=chr11:33280082..33280093,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.77e-10!124;CL:0000738!3.33e-10!140;CL:0002032!3.37e-10!165;CL:0000837!3.37e-10!165;CL:0000037!7.52e-10!172;CL:0000566!7.52e-10!172;CL:0000860!1.12e-08!45;CL:0002087!2.38e-08!119;CL:0000988!2.73e-08!182;CL:0000839!5.19e-08!70;CL:0000766!1.33e-07!76;CL:0002057!2.73e-07!42;CL:0000763!4.11e-07!112;CL:0000049!4.11e-07!112;CL:0000557!5.26e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000624;3.13e-14;6!CL:0002032;1.89e-10;1!CL:0000557;1.89e-10;1!CL:0000895;1.89e-10;1!CL:0000791;2.71e-08;18!CL:0000789;2.71e-08;18!CL:0002419;2.71e-08;18!CL:0000097;3.27e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.44e-14,6;CL:0000810,2.74e-10,1;CL:0000895,2.74e-10,1;CL:0002436,2.74e-10,1;CL:0002427,2.74e-10,1;CL:0002428,2.74e-10,1;CL:0002429,2.74e-10,1;CL:0002433,2.74e-10,1;CL:0002431,2.74e-10,1;CL:0002432,2.74e-10,1;CL:0000791,3.36e-08,18;CL:0000789,3.36e-08,18;CL:0002420,3.36e-08,18;CL:0002419,3.36e-08,18;CL:0000790,3.36e-08,18;CL:0000097,4.37e-08,5;CL:0002028,4.37e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002427;1.89e-10;1!UBERON:0010227;1.89e-10;1!UBERON:0004140;1.89e-10;1!CL:0000790;2.71e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.89e-10;1!UBERON:0000996;1.89e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,1.19e-10,1;UBERON:0000996,1.43e-10,1 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.08371286321253,0,0,0,0.232401601740905,0.284338464974843,0,0,0.401088894940283,0.217010870715852,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.232429036905685,0.411167888021826,0,0.28769239232215,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0,0,0,0,0.641858054152187,0,0.659702600373432,0.199463657621632,0,0.290209238628584,0.56738522469114,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0.425208599930087,0.209658645508376,0.44931452458598,0.450530678524519,0.32145117339416,0.855038231223746,0.79566670879636,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0,0.764546456250458,0,0.560508562981536,0.263384084775077,1.37696839079683,1.17903228824749,0.616804496998528,0,0.32592226663359,0.946895611469467,1.94826728407911,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0.593146252648242,0.535081656179426,0,0,1.14966148080576,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,1.00803371612366,0.802320587350522,0.579297615531196,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0.427114777637135,0.211931901159562,0,0.103052529238439,0,0.18611685633159,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0,0,0.435758888184812,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0,0,0.570762456703795,0,0,0,0,0.148631162288728,0,0.16798212819886,0,0,0,0,0.985326475791887,0.264145302039678,0.621984346622316,1.00883967391873,1.2624243342638,0,0,0,0,0,0,0.571652865261156,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,0.788123040807709,0.431255149719035,0.641715181398742,0,2.60279707715243,0,0,0,0,0,0.414415513436035,0.12269149171914,0.500170521059677,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.431428401637234,0.533637789017222,0.606255142892519,0,0,0.496215615637554,0.61384789315225,0,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0,0,0,0.184161977871793,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,1.09629938322967,0.784306353074702,0,0,0,0.412164046590889,0,0.165018999841176,0,0,0,0.193341436584244,0,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.267096106940212,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0,0.42793898803392,0,0,0.359744915166629,0,0,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0,0,0.376575203107117,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0,0,0,0,0.245040215981032,0,0,0.142283686696828,0,0,0.383010740264733,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0.333698283423817,0.19538809540204,0,0,0,0,0,1.12284324244932,0.73254089635947,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0.398495976502139,0,0,0.102268682502155,0.123084805461069,0,0,0,0,0.690503839458535,0,0,0,0.0927680981618513,0,0,0.262379999988587,1.44999915086959,0.227586896570999,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0.435753854075961,0.41827123283581,0.384751292518985,0,0,0,0.108647371922008,0.31900115973192,0.0915975934018623,0,0,0.31396051279005,0.166211681900156,0,0,0.335643173951685,0.189753732724185,0.158936578980379,0,0.163232808159148,0,0.649165919226273,0,0.176915129006678,0.611030144933625,0,0.123563938946503,0,0.202203398942031,0,0,0.182454789215666,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.379119477770928,0,0,0.664653872707185,0,0,0,0,0,0.347119476670262,0,0.435296032902013,0.17472666824203,0.171986032471617,0.387025325156341,0.438535902517113,0.574808199372465,0,0.0882561266915003,0,0,0,0,0.195551382734803,0,0,0,0.144090417154106,0,0.171594997861965,0.14405479798815,0.248505071130865,1.17847017308398,0.135904206073614,0,0,0,0,0,1.27746588066972,0,0.262887354279314,0.279282401272254,0.687481272035051,0,0.199679000498991,0.858452096273142,1.56220020209311,1.94832070211506,0,0,0.157566364614447,0,0.0674035438541849,0.196854963029498,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.209818352539992,0.105600336519406,0,0,1.42939065274673,0,0,0,0,0,0,0.328370082997356,0,0.113312091520126,0.586208934712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| ||
|short_description=p12@HIPK3 | |||
}} | }} |
Latest revision as of 16:31, 17 September 2015
Short description: | p12@HIPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_HIPK3_5end |
Coexpression cluster: | NA |
Association with transcript: | 205bp_to_ENST00000456517, ENST00000531504, uc009yjv.1_5end |
EntrezGene: | HIPK3 |
HGNC: | 4915 |
UniProt: | E9PKD7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.44e-14 | 6 |
CD4-positive, alpha-beta thymocyte | 2.74e-10 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 2.74e-10 | 1 |
mature CD4 single-positive thymocyte | 2.74e-10 | 1 |
resting double-positive thymocyte | 2.74e-10 | 1 |
double-positive blast | 2.74e-10 | 1 |
CD69-positive double-positive thymocyte | 2.74e-10 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 2.74e-10 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 2.74e-10 | 1 |
CD24-positive, CD4 single-positive thymocyte | 2.74e-10 | 1 |
mature alpha-beta T cell | 3.36e-08 | 18 |
alpha-beta T cell | 3.36e-08 | 18 |
immature T cell | 3.36e-08 | 18 |
mature T cell | 3.36e-08 | 18 |
immature alpha-beta T cell | 3.36e-08 | 18 |
mast cell | 4.37e-08 | 5 |
basophil mast progenitor cell | 4.37e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 1.19e-10 | 1 |
vagina | 1.43e-10 | 1 |