FFCP PHASE1:Hg19::chr12:18243080..18243091,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26213 | |||
|TSSclassifier=strong | |||
|UniProt=G5EA41 | |||
|association_with_transcript=-5bp_to_ENST00000536890_5end | |||
|cluster_id=chr12:18243080..18243091,- | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_3_at_RERGL_5end | |||
|id=chr12:18243080..18243091,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.37e-16;2!UBERON:0006242;2.30e-09;1!UBERON:0005754;2.30e-09;1!UBERON:0004874;2.30e-09;1!UBERON:0009143;5.97e-09;1!UBERON:0010115;5.97e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.75e-87!115;UBERON:0001049!9.74e-35!57;UBERON:0005068!9.74e-35!57;UBERON:0006241!9.74e-35!57;UBERON:0007135!9.74e-35!57;UBERON:0001017!7.49e-30!82;UBERON:0002346!9.43e-30!90;UBERON:0005743!1.32e-29!86;UBERON:0002616!3.35e-29!59;UBERON:0000955!5.36e-29!69;UBERON:0006238!5.36e-29!69;UBERON:0003075!5.24e-28!86;UBERON:0007284!5.24e-28!86;UBERON:0002780!2.89e-26!41;UBERON:0001890!2.89e-26!41;UBERON:0006240!2.89e-26!41;UBERON:0000073!8.56e-26!94;UBERON:0001016!8.56e-26!94;UBERON:0003080!1.74e-25!42;UBERON:0001893!1.43e-22!34;UBERON:0002020!2.53e-22!34;UBERON:0003528!2.53e-22!34;UBERON:0000153!8.63e-22!129;UBERON:0007811!8.63e-22!129;UBERON:0002791!5.86e-21!33;UBERON:0000033!1.14e-19!123;UBERON:0001869!1.88e-19!32;UBERON:0000924!5.23e-17!173;UBERON:0006601!5.23e-17!173;UBERON:0003056!6.53e-17!61;UBERON:0002619!8.29e-16!22;UBERON:0004121!1.09e-15!169;UBERON:0001950!6.23e-15!20;UBERON:0000956!1.43e-13!25;UBERON:0000203!1.43e-13!25;UBERON:0002308!5.53e-11!9;UBERON:0000125!5.53e-11!9;UBERON:0004111!5.67e-11!241;UBERON:0000477!1.03e-10!286;UBERON:0003076!2.92e-10!15;UBERON:0003057!2.92e-10!15;UBERON:0002298!6.05e-10!8;UBERON:0000481!2.28e-09!347;UBERON:0000025!2.39e-09!194;UBERON:0000475!6.65e-09!365;UBERON:0004733!2.22e-08!12;UBERON:0002028!2.22e-08!12;UBERON:0007277!2.22e-08!12;UBERON:0002420!3.26e-08!9;UBERON:0007245!3.26e-08!9;UBERON:0010009!3.26e-08!9;UBERON:0010011!3.26e-08!9;UBERON:0000454!3.26e-08!9;UBERON:0009663!9.61e-08!7;UBERON:0004732!1.20e-07!13;UBERON:0000062!1.52e-07!511;UBERON:0000988!2.28e-07!3;UBERON:0001872!4.35e-07!5;UBERON:0006331!4.41e-07!3;UBERON:0000922!5.21e-07!612;UBERON:0002050!8.08e-07!605;UBERON:0005423!8.08e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;1.37e-16;2!UBERON:0000094;1.37e-16;2!UBERON:0010743;1.37e-16;2!UBERON:0006947;2.26e-11;3!UBERON:0004054;2.26e-11;3!UBERON:0007023;1.36e-10;114!UBERON:0000989;2.30e-09;1!UBERON:0000998;2.30e-09;1!UBERON:0008811;2.30e-09;1!UBERON:0006868;2.30e-09;1!UBERON:0002363;5.97e-09;1!UBERON:0005795;5.97e-09;1!UBERON:0006834;5.97e-09;1!UBERON:0001301;5.97e-09;1!UBERON:0005904;9.55e-09;4!UBERON:0002050;3.20e-07;5!UBERON:0005423;3.20e-07;5!UBERON:0003135;5.70e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.63e-32,114;UBERON:0002360,1.00e-16,2;UBERON:0000094,1.00e-16,2;UBERON:0010743,1.00e-16,2;UBERON:0006947,2.15e-11,3;UBERON:0004054,2.15e-11,3;UBERON:0000989,2.04e-09,1;UBERON:0008811,2.04e-09,1;UBERON:0006258,2.04e-09,1;UBERON:0005876,2.04e-09,1;UBERON:0004874,2.04e-09,1;UBERON:0000998,2.40e-09,1;UBERON:0006868,2.40e-09,1;UBERON:0002363,4.54e-09,1;UBERON:0007645,4.54e-09,1;UBERON:0007647,4.54e-09,1;UBERON:0010115,4.54e-09,1;UBERON:0001301,5.31e-09,1;UBERON:0006834,9.17e-09,1;UBERON:0005904,9.20e-09,4;UBERON:0001017,1.23e-07,81;UBERON:0003135,5.42e-07,11;UBERON:0004876,5.42e-07,11;UBERON:0001016,9.79e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05111450980652,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0.398495976502139,0.552567831062295,0,0,0,0,0,0,0,0.986434056369336,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,0,0.110579259931225,1.18219047581419,2.19385397153973,0,0,4.46311499322023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.606610196826093,0,0.468528891450678,0,0,0,0,0,0,1.64285107034069,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,1.06687918137261,0,0,0,0,1.83601308272048,0,0,2.56143593687223,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0,0.279282401272254,0.916641696046735,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,1.36203406111576,0,0,0,0,0,0.607495566580247,0,2.04894838977915,0.996637174564964,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0.213574825135389,0.157204305099666,0,0,0,0,0,0,0,0.306345576763462,0.655745261419609,0,0,0,0.500763722825999,0,0.665574309221114,1.67660287941735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,6.80239744325385,0,0,0,0,0,0,0,0.642292250964595,0,0.478901577171454,1.02558182120378,0,0.553258019713743,0.645902582527404,0,0,0,0,0,0,0,0,1.12815492523886,0,0,0,0,0,0.742913430802341,0,0.413373593002368,0.634158101939068,0.546974809018219,0,2.48105589194647,0,0,0,0.672567444437648,0,0,0,0,0,1.90315252335129,0.526182188502793,0,0,1.72684804271131,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.430227358820278,0,0,2.11693525095465,0,0,0,0,0,0,0.647428837187895,1.64260490969995,0,0,0,0,0,0,0,0,0.540219106755613,0,0,1.47088993052343,0,0.196308467114945,0.297046400327086,0,0,0.375935671919414,0,0,0,0,0,0,0.458729283404541,0.716697915757256,0,0.543931921527318,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.985123076837112,0,0.829169439458779,0.310298987585686,0.852935927603924,0.476128862927481,0,0.0620747142958579,0,0.509177266225319,0.404234377916439,1.08858373948481,0.342233301085281,0.134704106029175,0.932388670104793,0.99798106963804,0,0,0,0,0,1.1001729976458,1.22068853494722,0.665756774185513,0.805095174364105,0 | |||
|short_description=p3@RERGL | |||
}} |
Latest revision as of 17:15, 17 September 2015
Short description: | p3@RERGL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RERGL_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | -5bp_to_ENST00000536890_5end |
EntrezGene: | RERGL |
HGNC: | 26213 |
UniProt: | G5EA41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.63e-32 | 114 |
meninx | 1.00e-16 | 2 |
membrane organ | 1.00e-16 | 2 |
meningeal cluster | 1.00e-16 | 2 |
male genital duct | 2.15e-11 | 3 |
internal male genitalia | 2.15e-11 | 3 |
penis | 2.04e-09 | 1 |
intromittent organ | 2.04e-09 | 1 |
lateral plate mesenchyme | 2.04e-09 | 1 |
undifferentiated genital tubercle | 2.04e-09 | 1 |
somatopleure | 2.04e-09 | 1 |
seminal vesicle | 2.40e-09 | 1 |
seminal fluid secreting gland | 2.40e-09 | 1 |
dura mater | 4.54e-09 | 1 |
future meninx | 4.54e-09 | 1 |
ectomeninx | 4.54e-09 | 1 |
future dura mater | 4.54e-09 | 1 |
epididymis | 5.31e-09 | 1 |
uterus or analog | 9.17e-09 | 1 |
duct of male reproductive system | 9.20e-09 | 4 |
central nervous system | 1.23e-07 | 81 |
male reproductive organ | 5.42e-07 | 11 |
urogenital ridge | 5.42e-07 | 11 |
nervous system | 9.79e-07 | 89 |