FFCP PHASE1:Hg19::chr11:3402189..3402191,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=650368 | |EntrezGene=650368 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=12384 | |HGNC=12384 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000529482,NR_024248,uc001lxw.3,uc001lxx.2,uc001lxy.2,uc010qxs.1_5end | |association_with_transcript=0bp_to_ENST00000529482,NR_024248,uc001lxw.3,uc001lxx.2,uc001lxy.2,uc010qxs.1_5end | ||
|cluster_id=chr11:3402189..3402191,+ | |||
|description=CAGE_peak_1_at_TSSC2_5end | |description=CAGE_peak_1_at_TSSC2_5end | ||
|id=chr11:3402189..3402191,+ | |id=chr11:3402189..3402191,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000057!1.45e-15!75;CL:0002620!1.23e-11!23;CL:0000393!2.53e-09!60;CL:0000211!2.53e-09!60;CL:0000187!2.10e-08!54;CL:0000183!1.47e-07!59;CL:0000680!1.75e-07!57;CL:0000056!1.75e-07!57;CL:0000355!1.75e-07!57;CL:0000192!3.16e-07!42;CL:0000514!3.16e-07!42 | |ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000057!1.45e-15!75;CL:0002620!1.23e-11!23;CL:0000393!2.53e-09!60;CL:0000211!2.53e-09!60;CL:0000187!2.10e-08!54;CL:0000183!1.47e-07!59;CL:0000680!1.75e-07!57;CL:0000056!1.75e-07!57;CL:0000355!1.75e-07!57;CL:0000192!3.16e-07!42;CL:0000514!3.16e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000136;8.49e-15;13!CL:0002321;5.47e-13;15!CL:0002322;2.77e-11;5!CL:0000333;1.31e-10;5!CL:0002598;2.19e-07;2!CL:0002561;4.37e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.73e-12,15;CL:0002322,3.87e-11,5;CL:0002561,2.16e-07,2;CL:0002598,2.23e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;7.59e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.24e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.73e-09!70;UBERON:0000914!3.22e-09!83;UBERON:0002329!3.22e-09!83;UBERON:0003077!3.22e-09!83;UBERON:0003059!3.22e-09!83;UBERON:0007282!3.22e-09!83;UBERON:0009618!3.22e-09!83;UBERON:0007285!3.22e-09!83;UBERON:0002199!3.55e-09!45;UBERON:0002416!3.55e-09!45;UBERON:0003102!3.66e-09!95;UBERON:0000475!9.23e-09!365;UBERON:0004573!4.39e-08!33;UBERON:0004571!4.39e-08!33;UBERON:0001637!5.16e-08!42;UBERON:0003509!5.16e-08!42;UBERON:0004572!5.16e-08!42;UBERON:0002097!2.63e-07!40;UBERON:0002385!5.98e-07!63;UBERON:0001015!5.98e-07!63;UBERON:0000383!5.98e-07!63;UBERON:0000486!7.93e-07!82 | |ontology_enrichment_uberon=UBERON:0004290!2.73e-09!70;UBERON:0000914!3.22e-09!83;UBERON:0002329!3.22e-09!83;UBERON:0003077!3.22e-09!83;UBERON:0003059!3.22e-09!83;UBERON:0007282!3.22e-09!83;UBERON:0009618!3.22e-09!83;UBERON:0007285!3.22e-09!83;UBERON:0002199!3.55e-09!45;UBERON:0002416!3.55e-09!45;UBERON:0003102!3.66e-09!95;UBERON:0000475!9.23e-09!365;UBERON:0004573!4.39e-08!33;UBERON:0004571!4.39e-08!33;UBERON:0001637!5.16e-08!42;UBERON:0003509!5.16e-08!42;UBERON:0004572!5.16e-08!42;UBERON:0002097!2.63e-07!40;UBERON:0002385!5.98e-07!63;UBERON:0001015!5.98e-07!63;UBERON:0000383!5.98e-07!63;UBERON:0000486!7.93e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.31e-10;5!UBERON:0002410;1.31e-10;5!UBERON:0005933;4.37e-07;2!UBERON:0005942;4.37e-07;2!UBERON:0005932;4.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.03e-10,5;UBERON:0002410,1.03e-10,5;UBERON:0005933,2.16e-07,2;UBERON:0005942,2.16e-07,2;UBERON:0005932,2.16e-07,2 | |||
|phase1_expression=0.181678379270557,1.07050261945492,2.25527046553554,1.0007329835313,0,0,0,0.631719873426831,2.08948502559871,0.982935746006035,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0.759783069987479,33.896750288184,2.58152958673932,0.709336764396714,0,0,0.98667019366864,0,0,0.163461903113459,0,0,0.70296429550139,4.68240115245481,0.570471821544449,2.69007624993242,1.05691048779388,0.971237666208789,0.702254033511242,0.816616685019573,0.245668634623536,0.516628905878827,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0,0,0,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0.900273288253207,0.309157587715317,0.257640540045629,0.744467425326359,7.59493495085698,0.389748020644795,0.504867548488229,0,0.969876340912871,0.355009592516614,0.201504196455281,0.67824236924195,0,0.272746120590835,0,4.39105342066543,1.06023814657188,0.580969714347592,3.31715376049185,11.6067591402789,5.47466038613745,0,0,1.38134921352481,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0.648119116109707,0.651616610620649,1.03993478527958,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0,0,0.845302752556,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,1.52283839490527,0.300946099727719,0,0,0,0,2.60650843404249,0.391602314925481,0,0,0,0,0,0,0,0,9.821566290436,0.561320188866147,0.128139149255701,0.511707249066704,1.28683136914886,0,1.07946785661859,0.887808626565635,0.328508624055237,0.519254429183621,0.581051892299796,0,0,0.0920809889358963,0.918515585316854,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0,0.618246069886334,0,0,0,0,0,0,1.3864375540318,0.921022048356777,0.275673144969061,1.07420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.638063562472921,0.10115778085555,0.929691098594572,3.77774816196768,2.0911118104818,0.308033580176089,0.532306030317022,0.869932992075073,1.29726953372744,0.572499546967965,0,0.316379424718726,0,2.303080121802,1.28381696410176,0.636406495851874,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,1.26377536871694,0.975267478179181,2.68084838594413,0,0.136499911407986,0.989838023675989,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0,0,0,0,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0.561421621224659,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0.311039587661807,0,0,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0,3.0510438035132,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0.113942055847001,0,1.70539524378567,0,0.31900115973192,0.366390373607449,0,0,0,0,0.902382642468723,0.784250137270958,3.18861015254101,3.41556718903533,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.822251547880505,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0,1.44119953416961,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,27.1672820905882,24.8946380240993,10.8014487887588,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,2.1760712134779,1.5041393641362,3.36980134439808,2.62298104567844,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,1.04478362020812,1.40227985908335,0,0,0.251567901752575,0,0,0.756154618816195,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.797525143673985,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,3.42631386309055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0.552317850755522,0.139879507719444,0,1.15104934173287,1.50954735955355,2.35898912783845,3.49470842214445,0,0.212574920101683,0,0,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,1.0529445968896,2.21875575573872,0,7.85720083444267,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| |phase1_expression=0.181678379270557,1.07050261945492,2.25527046553554,1.0007329835313,0,0,0,0.631719873426831,2.08948502559871,0.982935746006035,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.572471974262113,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.289693037921647,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0,0.419499436209906,0,0.417989933073621,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0,0,0,0,0,0,0,0,0.759783069987479,33.896750288184,2.58152958673932,0.709336764396714,0,0,0.98667019366864,0,0,0.163461903113459,0,0,0.70296429550139,4.68240115245481,0.570471821544449,2.69007624993242,1.05691048779388,0.971237666208789,0.702254033511242,0.816616685019573,0.245668634623536,0.516628905878827,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0,0,0,0,0.150238058906597,0,0.538168907066586,0.213557388818567,0,0.900273288253207,0.309157587715317,0.257640540045629,0.744467425326359,7.59493495085698,0.389748020644795,0.504867548488229,0,0.969876340912871,0.355009592516614,0.201504196455281,0.67824236924195,0,0.272746120590835,0,4.39105342066543,1.06023814657188,0.580969714347592,3.31715376049185,11.6067591402789,5.47466038613745,0,0,1.38134921352481,1.85747171212792,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0.648119116109707,0.651616610620649,1.03993478527958,0,0.34779121492523,0,0,0,0,0,0,0,0,0,0,0,0.425325291727159,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.2933531432838,0,0,0.845302752556,0,0,0,0,0,0.714889968290738,0,0,0.325736184293735,1.06617584622764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,1.52283839490527,0.300946099727719,0,0,0,0,2.60650843404249,0.391602314925481,0,0,0,0,0,0,0,0,9.821566290436,0.561320188866147,0.128139149255701,0.511707249066704,1.28683136914886,0,1.07946785661859,0.887808626565635,0.328508624055237,0.519254429183621,0.581051892299796,0,0,0.0920809889358963,0.918515585316854,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0.512900250232778,0.656029291399411,0,0.618246069886334,0,0,0,0,0,0,1.3864375540318,0.921022048356777,0.275673144969061,1.07420244868274,0.145016693914229,0.0852266274161009,0,0,0,0.638063562472921,0.10115778085555,0.929691098594572,3.77774816196768,2.0911118104818,0.308033580176089,0.532306030317022,0.869932992075073,1.29726953372744,0.572499546967965,0,0.316379424718726,0,2.303080121802,1.28381696410176,0.636406495851874,0,0,0.274537029736055,0.353437207037059,0.404364963146632,0,1.26377536871694,0.975267478179181,2.68084838594413,0,0.136499911407986,0.989838023675989,1.13008116620243,0,0,0.438450885253763,0,0.655894752046633,0,0.6196469961995,0,0.286822704408103,0.196498082026242,0,0,0,0,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0.561421621224659,0.439524537815682,0,0,0,0.47748896947538,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0.311039587661807,0,0,0,0.789147245095469,0,0,0,0.278304294485554,0,0,0,1.44999915086959,0,3.0510438035132,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0.384751292518985,0.113942055847001,0,1.70539524378567,0,0.31900115973192,0.366390373607449,0,0,0,0,0.902382642468723,0.784250137270958,3.18861015254101,3.41556718903533,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.695052375913368,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.822251547880505,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.399358000997982,0,0,0,1.44119953416961,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,27.1672820905882,24.8946380240993,10.8014487887588,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.129282956361551,0,0,0,0.106787412567695,0.157204305099666,0.828478110694391,0.496166021811951,0,0,0,2.1760712134779,1.5041393641362,3.36980134439808,2.62298104567844,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0,0,0,1.04478362020812,1.40227985908335,0,0,0.251567901752575,0,0,0.756154618816195,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0.155262956876259,0.414706207840855,0.797525143673985,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0,3.42631386309055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0.552317850755522,0.139879507719444,0,1.15104934173287,1.50954735955355,2.35898912783845,3.49470842214445,0,0.212574920101683,0,0,0.636008701306837,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0.504143392443436,0.0691572524642179,0.161475645631851,0,0,0.235939446695481,0,0,0,0,0,1.0529445968896,2.21875575573872,0,7.85720083444267,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| ||
|short_description=p1@TSSC2 | |short_description=p1@TSSC2 | ||
}} | }} |
Latest revision as of 17:21, 17 September 2015
Short description: | p1@TSSC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSSC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000529482, NR_024248, uc001lxw.3, uc001lxx.2, uc001lxy.2, uc010qxs.1_5end |
EntrezGene: | LOC650368 |
HGNC: | 12384 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.73e-12 | 15 |
embryonic stem cell | 3.87e-11 | 5 |
outer root sheath cell | 2.16e-07 | 2 |
bronchial smooth muscle cell | 2.23e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.03e-10 | 5 |
autonomic nervous system | 1.03e-10 | 5 |
hair root sheath | 2.16e-07 | 2 |
hair outer root sheath | 2.16e-07 | 2 |
bulb of hair follicle | 2.16e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.24e-09 | 6 |