FFCP PHASE1:Hg19::chr1:156722085..156722104,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156722085..156722104,- to FFCP PHASE1:Hg19::chr1:156722085..156722104,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3068 | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |HGNC=4856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000471377_5end | |||
|cluster_id=chr1:156722085..156722104,- | |||
|description=CAGE_peak_9_at_HDGF_5end | |||
|id=chr1:156722085..156722104,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.59e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.46e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001637!6.84e-10!42;UBERON:0003509!6.84e-10!42;UBERON:0004572!6.84e-10!42;UBERON:0000475!5.86e-09!365;UBERON:0000468!5.95e-08!659;UBERON:0000467!9.08e-08!625;UBERON:0000480!1.47e-07!626;UBERON:0004573!1.63e-07!33;UBERON:0004571!1.63e-07!33;UBERON:0000486!9.65e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.82e-09;42!UBERON:0003509;3.82e-09;42!UBERON:0004572;3.82e-09;42!UBERON:0004573;8.43e-08;33!UBERON:0004571;8.43e-08;33!UBERON:0004457;2.40e-07;9!UBERON:0000042;2.40e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.01e-11,42;UBERON:0003509,2.01e-11,42;UBERON:0004572,2.01e-11,42;UBERON:0004573,1.00e-08,33;UBERON:0004571,1.00e-08,33;UBERON:0004872,3.51e-07,83;UBERON:0007500,4.30e-07,59;UBERON:0001981,4.30e-07,59;UBERON:0004537,4.30e-07,59;UBERON:0006965,4.30e-07,59;UBERON:0003914,9.48e-07,117 | |||
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| ||
|short_description=p9@HDGF | |||
}} | }} |
Latest revision as of 17:57, 17 September 2015
Short description: | p9@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_HDGF_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000471377_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.46e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
artery | 2.01e-11 | 42 |
arterial blood vessel | 2.01e-11 | 42 |
arterial system | 2.01e-11 | 42 |
systemic artery | 1.00e-08 | 33 |
systemic arterial system | 1.00e-08 | 33 |
splanchnic layer of lateral plate mesoderm | 3.51e-07 | 83 |
epithelial tube open at both ends | 4.30e-07 | 59 |
blood vessel | 4.30e-07 | 59 |
blood vasculature | 4.30e-07 | 59 |
vascular cord | 4.30e-07 | 59 |
epithelial tube | 9.48e-07 | 117 |