FFCP PHASE1:Hg19::chr12:19592405..19592492,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:19592405..19592492,+
|short_description=p2@AEBP2
|description=CAGE_peak_2_at_AEBP2_5end
|association_with_transcript=-115bp_to_ENST00000398864,NM_00111417...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121536 | |EntrezGene=121536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24051 | |HGNC=24051 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN18 | |UniProt=Q6ZN18 | ||
|association_with_transcript=-115bp_to_ENST00000398864,NM_001114176,NM_153207,uc001ree.2,uc001ref.2_5end | |||
|cluster_id=chr12:19592405..19592492,+ | |||
|coexpression_cluster_id=C128 | |||
|description=CAGE_peak_2_at_AEBP2_5end | |||
|id=chr12:19592405..19592492,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.20e-16!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.34e-17,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.14e-07;29!UBERON:0006595;8.38e-07;86 | |||
|ontology_enrichment_disease=DOID:162!6.14e-32!235;DOID:14566!1.80e-29!239;DOID:0050687!1.93e-29!143;DOID:305!1.14e-23!106;DOID:3095!6.60e-10!22;DOID:2994!6.60e-10!22;DOID:0050686!2.68e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.97e-10;22!DOID:2994;4.97e-10;22!DOID:305;4.22e-08;106!DOID:0050687;4.49e-07;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.41e-32,235;DOID:14566,1.94e-29,239;DOID:0050687,2.04e-29,143;DOID:305,1.20e-23,106;DOID:3095,6.60e-10,22;DOID:2994,6.60e-10,22;DOID:0050686,2.75e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0004921!6.21e-12!129;UBERON:0004185!6.21e-12!129;UBERON:0004119!1.98e-10!169;UBERON:0000925!1.98e-10!169;UBERON:0006595!1.98e-10!169;UBERON:0001007!3.42e-10!155;UBERON:0001555!3.42e-10!155;UBERON:0007026!3.42e-10!155;UBERON:0000077!7.72e-10!130;UBERON:0001041!9.66e-09!98;UBERON:0007023!1.17e-07!115;UBERON:0001048!1.33e-07!168;UBERON:0005409!2.25e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.67e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,3.73e-11,223;UBERON:0004921,1.31e-09,118;UBERON:0004119,4.72e-08,160;UBERON:0000925,4.72e-08,160;UBERON:0006595,4.72e-08,160;UBERON:0001007,6.11e-08,145;UBERON:0001555,6.11e-08,145;UBERON:0007026,6.11e-08,145;UBERON:0007023,1.82e-07,114 | |||
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| ||
|short_description=p2@AEBP2 | |||
}} | }} |
Latest revision as of 18:04, 17 September 2015
Short description: | p2@AEBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AEBP2_5end |
Coexpression cluster: | C128_testicular_choriocarcinoma_H9_teratocarcinoma_pancreatic_iPS_HES3GFP |
Association with transcript: | -115bp_to_ENST00000398864, NM_001114176, NM_153207, uc001ree.2, uc001ref.2_5end |
EntrezGene: | AEBP2 |
HGNC: | 24051 |
UniProt: | Q6ZN18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.34e-17 | 253 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 3.73e-11 | 223 |
subdivision of digestive tract | 1.31e-09 | 118 |
endoderm-derived structure | 4.72e-08 | 160 |
endoderm | 4.72e-08 | 160 |
presumptive endoderm | 4.72e-08 | 160 |
digestive system | 6.11e-08 | 145 |
digestive tract | 6.11e-08 | 145 |
primitive gut | 6.11e-08 | 145 |
adult organism | 1.82e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.41e-32 | 235 |
disease of cellular proliferation | 1.94e-29 | 239 |
cell type cancer | 2.04e-29 | 143 |
carcinoma | 1.20e-23 | 106 |
germ cell and embryonal cancer | 6.60e-10 | 22 |
germ cell cancer | 6.60e-10 | 22 |
organ system cancer | 2.75e-08 | 137 |