FFCP PHASE1:Hg19::chr4:40517922..40517933,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54502 | |EntrezGene=54502 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30358 | |HGNC=30358 | ||
|TSSclassifier=strong | |||
|UniProt=A0AV96 | |UniProt=A0AV96 | ||
|association_with_transcript=56bp_to_ENST00000381795,NM_019027,uc003gvd.2_5end | |association_with_transcript=56bp_to_ENST00000381795,NM_019027,uc003gvd.2_5end | ||
|cluster_id=chr4:40517922..40517933,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_32_at_RBM47_5end | |description=CAGE_peak_32_at_RBM47_5end | ||
|id=chr4:40517922..40517933,- | |id=chr4:40517922..40517933,- | ||
|ontology_enrichment_celltype=CL:0000077!7.47e-08!19;CL:0000066!2.41e-07!254;CL:0000223!2.79e-07!59 | |ontology_enrichment_celltype=CL:0000077!7.47e-08!19;CL:0000066!2.41e-07!254;CL:0000223!2.79e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!8.24e-09!106;DOID:3493!1.16e-07!2;DOID:4929!1.62e-07!2;DOID:162!4.00e-07!235;DOID:14566!8.03e-07!239;DOID:0050687!9.24e-07!143 | |ontology_enrichment_disease=DOID:305!8.24e-09!106;DOID:3493!1.16e-07!2;DOID:4929!1.62e-07!2;DOID:162!4.00e-07!235;DOID:14566!8.03e-07!239;DOID:0050687!9.24e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009497!4.67e-13!25;UBERON:0000015!4.67e-13!25;UBERON:0002423!4.67e-13!25;UBERON:0006235!4.67e-13!25;UBERON:0004161!4.67e-13!25;UBERON:0008835!2.16e-12!22;UBERON:0003894!2.16e-12!22;UBERON:0009854!9.14e-12!23;UBERON:0004921!1.74e-11!129;UBERON:0004185!1.74e-11!129;UBERON:0005409!5.45e-11!35;UBERON:0007499!1.15e-10!25;UBERON:0004119!1.72e-10!169;UBERON:0000925!1.72e-10!169;UBERON:0006595!1.72e-10!169;UBERON:0000160!1.93e-10!27;UBERON:0001007!3.09e-10!155;UBERON:0001555!3.09e-10!155;UBERON:0007026!3.09e-10!155;UBERON:0009856!3.53e-10!26;UBERON:0003929!8.76e-10!54;UBERON:0005911!2.47e-08!82;UBERON:0005172!5.95e-08!55;UBERON:0005173!5.95e-08!55;UBERON:0002394!1.27e-07!4;UBERON:0003928!1.27e-07!4;UBERON:0002294!1.85e-07!7;UBERON:0001173!1.85e-07!7;UBERON:0004912!1.85e-07!7;UBERON:0002107!3.03e-07!19;UBERON:0006925!3.03e-07!19;UBERON:0008836!3.03e-07!19;UBERON:0002417!7.01e-07!61;UBERON:0000916!7.01e-07!61 | |ontology_enrichment_uberon=UBERON:0009497!4.67e-13!25;UBERON:0000015!4.67e-13!25;UBERON:0002423!4.67e-13!25;UBERON:0006235!4.67e-13!25;UBERON:0004161!4.67e-13!25;UBERON:0008835!2.16e-12!22;UBERON:0003894!2.16e-12!22;UBERON:0009854!9.14e-12!23;UBERON:0004921!1.74e-11!129;UBERON:0004185!1.74e-11!129;UBERON:0005409!5.45e-11!35;UBERON:0007499!1.15e-10!25;UBERON:0004119!1.72e-10!169;UBERON:0000925!1.72e-10!169;UBERON:0006595!1.72e-10!169;UBERON:0000160!1.93e-10!27;UBERON:0001007!3.09e-10!155;UBERON:0001555!3.09e-10!155;UBERON:0007026!3.09e-10!155;UBERON:0009856!3.53e-10!26;UBERON:0003929!8.76e-10!54;UBERON:0005911!2.47e-08!82;UBERON:0005172!5.95e-08!55;UBERON:0005173!5.95e-08!55;UBERON:0002394!1.27e-07!4;UBERON:0003928!1.27e-07!4;UBERON:0002294!1.85e-07!7;UBERON:0001173!1.85e-07!7;UBERON:0004912!1.85e-07!7;UBERON:0002107!3.03e-07!19;UBERON:0006925!3.03e-07!19;UBERON:0008836!3.03e-07!19;UBERON:0002417!7.01e-07!61;UBERON:0000916!7.01e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002108;2.30e-51;4!UBERON:0000160;2.02e-39;17!UBERON:0005409;5.57e-31;22!UBERON:0004921;4.35e-18;33!UBERON:0001155;1.49e-13;9!UBERON:0000059;2.83e-11;11!UBERON:0002114;9.43e-11;2!UBERON:0001555;1.09e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,2.73e-51,4;UBERON:0000160,1.59e-39,17;UBERON:0005409,1.53e-27,25;UBERON:0001155,1.15e-13,9;UBERON:0000059,2.30e-11,11;UBERON:0002114,1.09e-10,2;UBERON:0004921,8.24e-09,118;UBERON:0001007,3.33e-07,145;UBERON:0001555,3.33e-07,145;UBERON:0007026,3.33e-07,145 | |||
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| ||
|short_description=p32@RBM47 | |short_description=p32@RBM47 | ||
}} | }} |
Latest revision as of 18:40, 17 September 2015
Short description: | p32@RBM47 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_RBM47_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 56bp_to_ENST00000381795, NM_019027, uc003gvd.2_5end |
EntrezGene: | RBM47 |
HGNC: | 30358 |
UniProt: | A0AV96 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
small intestine | 2.73e-51 | 4 |
intestine | 1.59e-39 | 17 |
gastrointestinal system | 1.53e-27 | 25 |
colon | 1.15e-13 | 9 |
large intestine | 2.30e-11 | 11 |
duodenum | 1.09e-10 | 2 |
subdivision of digestive tract | 8.24e-09 | 118 |
digestive system | 3.33e-07 | 145 |
digestive tract | 3.33e-07 | 145 |
primitive gut | 3.33e-07 | 145 |