FFCP PHASE1:Hg19::chr9:73477985..73477993,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000377097_5end | |association_with_transcript=-31bp_to_ENST00000377097_5end | ||
|cluster_id=chr9:73477985..73477993,- | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_17_at_TRPM3_5end | |description=CAGE_peak_17_at_TRPM3_5end | ||
|id=chr9:73477985..73477993,- | |id=chr9:73477985..73477993,- | ||
|ontology_enrichment_celltype=CL:0000064!2.49e-18!3;CL:0005012!2.49e-18!3;CL:0000067!2.49e-18!3;CL:0002304!2.49e-18!3;CL:0000342!2.35e-07!1;CL:0002565!2.35e-07!1 | |ontology_enrichment_celltype=CL:0000064!2.49e-18!3;CL:0005012!2.49e-18!3;CL:0000067!2.49e-18!3;CL:0002304!2.49e-18!3;CL:0000342!2.35e-07!1;CL:0002565!2.35e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000243;4.22e-13;15!CL:0000125;4.22e-13;15!CL:0000095;6.95e-12;17!CL:0002319;8.32e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,4.22e-13,15;CL:0000125,4.22e-13,15;CL:0000030,4.22e-13,15;CL:0000339,4.22e-13,15;CL:0000095,6.95e-12,17;CL:0000123,6.95e-12,17;CL:0002319,8.32e-09,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.25e-19;10!CL:0000339;4.22e-13;15 | |||
|ontology_enrichment_disease=DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1 | |ontology_enrichment_disease=DOID:0050619!2.66e-07!1;DOID:1357!2.66e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:3093;6.76e-18;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,6.76e-18,11 | |||
|ontology_enrichment_uberon=UBERON:0003075!1.91e-26!86;UBERON:0007284!1.91e-26!86;UBERON:0002346!4.31e-25!90;UBERON:0003076!6.00e-25!15;UBERON:0003057!6.00e-25!15;UBERON:0000488!5.91e-24!4;UBERON:0005743!1.37e-23!86;UBERON:0001049!1.44e-23!57;UBERON:0005068!1.44e-23!57;UBERON:0006241!1.44e-23!57;UBERON:0007135!1.44e-23!57;UBERON:0001017!3.35e-22!82;UBERON:0000073!5.13e-21!94;UBERON:0001016!5.13e-21!94;UBERON:0001896!3.53e-19!3;UBERON:0005290!3.53e-19!3;UBERON:0010096!3.53e-19!3;UBERON:0000033!6.04e-19!123;UBERON:0002298!1.07e-18!8;UBERON:0000955!1.35e-18!69;UBERON:0006238!1.35e-18!69;UBERON:0001778!2.49e-18!3;UBERON:0001775!2.49e-18!3;UBERON:0000153!7.17e-18!129;UBERON:0007811!7.17e-18!129;UBERON:0004733!1.01e-17!12;UBERON:0002028!1.01e-17!12;UBERON:0007277!1.01e-17!12;UBERON:0004121!3.82e-17!169;UBERON:0002616!5.42e-17!59;UBERON:0000924!1.22e-16!173;UBERON:0006601!1.22e-16!173;UBERON:0004732!2.55e-16!13;UBERON:0002203!4.71e-16!6;UBERON:0001768!4.71e-16!6;UBERON:0007023!3.97e-15!115;UBERON:0003056!6.16e-14!61;UBERON:0000970!2.08e-10!20;UBERON:0002791!2.48e-10!33;UBERON:0001893!5.29e-10!34;UBERON:0002020!5.86e-10!34;UBERON:0003528!5.86e-10!34;UBERON:0002104!6.90e-10!21;UBERON:0002240!2.33e-09!3;UBERON:0006947!2.99e-09!3;UBERON:0004054!2.99e-09!3;UBERON:0002619!4.40e-09!22;UBERON:0000020!5.57e-09!23;UBERON:0007625!7.89e-09!11;UBERON:0002200!7.89e-09!11;UBERON:0006876!7.89e-09!11;UBERON:0000988!1.09e-08!3;UBERON:0001032!1.39e-08!24;UBERON:0004456!1.39e-08!24;UBERON:0001869!3.16e-08!32;UBERON:0002780!3.83e-08!41;UBERON:0001890!3.83e-08!41;UBERON:0006240!3.83e-08!41;UBERON:0000956!5.71e-08!25;UBERON:0000203!5.71e-08!25;UBERON:0003080!6.31e-08!42;UBERON:0000019!9.16e-08!19;UBERON:0000047!9.16e-08!19;UBERON:0004088!9.16e-08!19;UBERON:0003072!9.16e-08!19;UBERON:0003071!9.16e-08!19;UBERON:0004128!9.16e-08!19;UBERON:0000998!9.71e-08!1;UBERON:0006868!9.71e-08!1;UBERON:0000475!1.25e-07!365;UBERON:0002336!1.95e-07!1;UBERON:0001018!1.95e-07!1;UBERON:0002473!1.95e-07!1;UBERON:0005340!1.95e-07!1;UBERON:0002316!1.95e-07!1;UBERON:0003544!1.95e-07!1;UBERON:0001020!1.95e-07!1;UBERON:0005970!1.95e-07!1;UBERON:0002437!1.95e-07!1;UBERON:0001301!2.21e-07!1;UBERON:0002506!2.35e-07!1;UBERON:0001769!2.35e-07!1;UBERON:0001874!2.50e-07!1;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1;UBERON:0001950!3.64e-07!20;UBERON:0005904!3.85e-07!4;UBERON:0001456!5.30e-07!21;UBERON:0001801!5.85e-07!14 | |ontology_enrichment_uberon=UBERON:0003075!1.91e-26!86;UBERON:0007284!1.91e-26!86;UBERON:0002346!4.31e-25!90;UBERON:0003076!6.00e-25!15;UBERON:0003057!6.00e-25!15;UBERON:0000488!5.91e-24!4;UBERON:0005743!1.37e-23!86;UBERON:0001049!1.44e-23!57;UBERON:0005068!1.44e-23!57;UBERON:0006241!1.44e-23!57;UBERON:0007135!1.44e-23!57;UBERON:0001017!3.35e-22!82;UBERON:0000073!5.13e-21!94;UBERON:0001016!5.13e-21!94;UBERON:0001896!3.53e-19!3;UBERON:0005290!3.53e-19!3;UBERON:0010096!3.53e-19!3;UBERON:0000033!6.04e-19!123;UBERON:0002298!1.07e-18!8;UBERON:0000955!1.35e-18!69;UBERON:0006238!1.35e-18!69;UBERON:0001778!2.49e-18!3;UBERON:0001775!2.49e-18!3;UBERON:0000153!7.17e-18!129;UBERON:0007811!7.17e-18!129;UBERON:0004733!1.01e-17!12;UBERON:0002028!1.01e-17!12;UBERON:0007277!1.01e-17!12;UBERON:0004121!3.82e-17!169;UBERON:0002616!5.42e-17!59;UBERON:0000924!1.22e-16!173;UBERON:0006601!1.22e-16!173;UBERON:0004732!2.55e-16!13;UBERON:0002203!4.71e-16!6;UBERON:0001768!4.71e-16!6;UBERON:0007023!3.97e-15!115;UBERON:0003056!6.16e-14!61;UBERON:0000970!2.08e-10!20;UBERON:0002791!2.48e-10!33;UBERON:0001893!5.29e-10!34;UBERON:0002020!5.86e-10!34;UBERON:0003528!5.86e-10!34;UBERON:0002104!6.90e-10!21;UBERON:0002240!2.33e-09!3;UBERON:0006947!2.99e-09!3;UBERON:0004054!2.99e-09!3;UBERON:0002619!4.40e-09!22;UBERON:0000020!5.57e-09!23;UBERON:0007625!7.89e-09!11;UBERON:0002200!7.89e-09!11;UBERON:0006876!7.89e-09!11;UBERON:0000988!1.09e-08!3;UBERON:0001032!1.39e-08!24;UBERON:0004456!1.39e-08!24;UBERON:0001869!3.16e-08!32;UBERON:0002780!3.83e-08!41;UBERON:0001890!3.83e-08!41;UBERON:0006240!3.83e-08!41;UBERON:0000956!5.71e-08!25;UBERON:0000203!5.71e-08!25;UBERON:0003080!6.31e-08!42;UBERON:0000019!9.16e-08!19;UBERON:0000047!9.16e-08!19;UBERON:0004088!9.16e-08!19;UBERON:0003072!9.16e-08!19;UBERON:0003071!9.16e-08!19;UBERON:0004128!9.16e-08!19;UBERON:0000998!9.71e-08!1;UBERON:0006868!9.71e-08!1;UBERON:0000475!1.25e-07!365;UBERON:0002336!1.95e-07!1;UBERON:0001018!1.95e-07!1;UBERON:0002473!1.95e-07!1;UBERON:0005340!1.95e-07!1;UBERON:0002316!1.95e-07!1;UBERON:0003544!1.95e-07!1;UBERON:0001020!1.95e-07!1;UBERON:0005970!1.95e-07!1;UBERON:0002437!1.95e-07!1;UBERON:0001301!2.21e-07!1;UBERON:0002506!2.35e-07!1;UBERON:0001769!2.35e-07!1;UBERON:0001874!2.50e-07!1;UBERON:0001764!2.66e-07!1;UBERON:0001825!2.66e-07!1;UBERON:0001950!3.64e-07!20;UBERON:0005904!3.85e-07!4;UBERON:0001456!5.30e-07!21;UBERON:0001801!5.85e-07!14 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.124192805882767,2.76697269872462,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0.573409195690071,0.221858103073705,0.124192805882767,2.76697269872462,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p17@TRPM3 | |short_description=p17@TRPM3 | ||
}} | }} |
Latest revision as of 18:41, 17 September 2015
Short description: | p17@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_TRPM3_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -31bp_to_ENST00000377097_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 4.22e-13 | 15 |
glial cell | 4.22e-13 | 15 |
glioblast | 4.22e-13 | 15 |
glioblast (sensu Vertebrata) | 4.22e-13 | 15 |
neuron associated cell | 6.95e-12 | 17 |
neuron associated cell (sensu Vertebrata) | 6.95e-12 | 17 |
neural cell | 8.32e-09 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 6.76e-18 | 11 |