FFCP PHASE1:Hg19::chr1:157069590..157069607,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=440695 | |EntrezGene=440695 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33834 | |HGNC=33834 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN32 | |UniProt=Q6ZN32 | ||
|association_with_transcript=0bp_to_ENST00000454449,NM_001004341,uc001fqq.1_5end | |association_with_transcript=0bp_to_ENST00000454449,NM_001004341,uc001fqq.1_5end | ||
|cluster_id=chr1:157069590..157069607,- | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_1_at_ETV3L_5end | |description=CAGE_peak_1_at_ETV3L_5end | ||
|id=chr1:157069590..157069607,- | |id=chr1:157069590..157069607,- | ||
|ontology_enrichment_celltype=CL:0002322!1.02e-16!5;CL:0002057!8.51e-07!42 | |ontology_enrichment_celltype=CL:0002322!1.02e-16!5;CL:0002057!8.51e-07!42 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.30e-08;3!UBERON:0003057;1.30e-08;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003296!4.52e-13!4;UBERON:0010133!4.52e-13!4;UBERON:0001905!2.84e-12!2;UBERON:0002757!2.84e-12!2;UBERON:0010134!2.84e-12!2;UBERON:0002784!2.84e-12!2;UBERON:0005408!2.84e-12!2;UBERON:0001899!2.84e-12!2;UBERON:0006331!3.19e-08!3;UBERON:0001894!1.20e-07!7;UBERON:0006222!1.20e-07!7 | |ontology_enrichment_uberon=UBERON:0003296!4.52e-13!4;UBERON:0010133!4.52e-13!4;UBERON:0001905!2.84e-12!2;UBERON:0002757!2.84e-12!2;UBERON:0010134!2.84e-12!2;UBERON:0002784!2.84e-12!2;UBERON:0005408!2.84e-12!2;UBERON:0001899!2.84e-12!2;UBERON:0006331!3.19e-08!3;UBERON:0001894!1.20e-07!7;UBERON:0006222!1.20e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.03e-45;2!UBERON:0002757;2.03e-45;2!UBERON:0010134;2.03e-45;2!UBERON:0005408;2.03e-45;2!UBERON:0001899;2.03e-45;2!UBERON:0003296;2.63e-23;4!UBERON:0010133;2.63e-23;4!UBERON:0002784;2.63e-23;4!UBERON:0001894;8.94e-14;7!UBERON:0002360;1.85e-12;2!UBERON:0000094;1.85e-12;2!UBERON:0010743;1.85e-12;2!UBERON:0002148;2.07e-12;2!UBERON:0006331;2.07e-12;2!UBERON:0009662;2.07e-12;2!UBERON:0000988;1.04e-08;3!UBERON:0002240;1.30e-08;3!UBERON:0005174;1.30e-08;3!UBERON:0001137;1.30e-08;3!UBERON:0001017;4.82e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.04e-45,2;UBERON:0002757,2.04e-45,2;UBERON:0010134,2.04e-45,2;UBERON:0005408,2.04e-45,2;UBERON:0001899,2.04e-45,2;UBERON:0003296,2.63e-23,4;UBERON:0010133,2.63e-23,4;UBERON:0002784,2.63e-23,4;UBERON:0001894,8.94e-14,7;UBERON:0006222,8.94e-14,7;UBERON:0002360,1.85e-12,2;UBERON:0000094,1.85e-12,2;UBERON:0010743,1.85e-12,2;UBERON:0002148,2.07e-12,2;UBERON:0006331,2.07e-12,2;UBERON:0009662,2.07e-12,2;UBERON:0001017,1.28e-09,81;UBERON:0000988,1.04e-08,3;UBERON:0001016,1.13e-08,89;UBERON:0002240,1.30e-08,3;UBERON:0005174,1.30e-08,3;UBERON:0001137,1.30e-08,3;UBERON:0003076,8.09e-07,15;UBERON:0003057,8.09e-07,15 | |||
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|short_description=p1@ETV3L | |short_description=p1@ETV3L | ||
}} | }} |
Latest revision as of 18:48, 17 September 2015
Short description: | p1@ETV3L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ETV3L_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 0bp_to_ENST00000454449, NM_001004341, uc001fqq.1_5end |
EntrezGene: | ETV3L |
HGNC: | 33834 |
UniProt: | Q6ZN32 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.04e-45 | 2 |
regional part of epithalamus | 2.04e-45 | 2 |
secretory circumventricular organ | 2.04e-45 | 2 |
circumventricular organ | 2.04e-45 | 2 |
epithalamus | 2.04e-45 | 2 |
gland of diencephalon | 2.63e-23 | 4 |
neuroendocrine gland | 2.63e-23 | 4 |
regional part of diencephalon | 2.63e-23 | 4 |
diencephalon | 8.94e-14 | 7 |
future diencephalon | 8.94e-14 | 7 |
meninx | 1.85e-12 | 2 |
membrane organ | 1.85e-12 | 2 |
meningeal cluster | 1.85e-12 | 2 |
locus ceruleus | 2.07e-12 | 2 |
brainstem nucleus | 2.07e-12 | 2 |
hindbrain nucleus | 2.07e-12 | 2 |
central nervous system | 1.28e-09 | 81 |
pons | 1.04e-08 | 3 |
nervous system | 1.13e-08 | 89 |
spinal cord | 1.30e-08 | 3 |
dorsal region element | 1.30e-08 | 3 |
dorsum | 1.30e-08 | 3 |
posterior neural tube | 8.09e-07 | 15 |
chordal neural plate | 8.09e-07 | 15 |