FFCP PHASE1:Hg19::chr2:16081024..16081034,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4613 | |EntrezGene=4613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7559 | |HGNC=7559 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=464bp_to_M55330_5end | |association_with_transcript=464bp_to_M55330_5end | ||
|cluster_id=chr2:16081024..16081034,+ | |||
|coexpression_cluster_id=C135 | |coexpression_cluster_id=C135 | ||
|description=CAGE_peak_10_at_MYCN_5end | |description=CAGE_peak_10_at_MYCN_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!3.57e-23!7;CL:0000586!3.57e-23!7;CL:0000047!8.04e-08!8;CL:0000133!2.46e-07!59 | |ontology_enrichment_celltype=CL:0000039!3.57e-23!7;CL:0000586!3.57e-23!7;CL:0000047!8.04e-08!8;CL:0000133!2.46e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000333;7.76e-118;5!CL:0002321;2.90e-40;15 | |ontology_enrichment_celltype_v019=CL:0000333;7.76e-118;5!CL:0002321;2.90e-40;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,7.46e-15,41;CL:0000133,8.52e-11,59;CL:0000221,4.40e-09,72 | |||
|ontology_enrichment_development_v019=CL:0000221;6.75e-10;72!CL:0000133;1.65e-07;59 | |ontology_enrichment_development_v019=CL:0000221;6.75e-10;72!CL:0000133;1.65e-07;59 | ||
|ontology_enrichment_disease=DOID:3095!1.83e-28!22;DOID:2994!1.83e-28!22;DOID:169!6.17e-11!6;DOID:9119!3.32e-08!1;DOID:1799!5.33e-08!1;DOID:10165!5.33e-08!1;DOID:1798!5.33e-08!1;DOID:171!9.96e-07!10 | |ontology_enrichment_disease=DOID:3095!1.83e-28!22;DOID:2994!1.83e-28!22;DOID:169!6.17e-11!6;DOID:9119!3.32e-08!1;DOID:1799!5.33e-08!1;DOID:10165!5.33e-08!1;DOID:1798!5.33e-08!1;DOID:171!9.96e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:169;1.83e-98;6!DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | |ontology_enrichment_disease_v019=DOID:169;1.83e-98;6!DOID:171;1.10e-59;10!DOID:3095;7.08e-28;22!DOID:2994;7.08e-28;22 | ||
|ontology_enrichment_disease_v019_2=DOID:169,1.83e-98,6;DOID:171,1.10e-59,10;DOID:3095,7.08e-28,22;DOID:2994,7.08e-28,22 | |||
|ontology_enrichment_uberon=UBERON:0000013!5.00e-13!5;UBERON:0002410!5.00e-13!5;UBERON:0000073!6.70e-12!94;UBERON:0001016!6.70e-12!94;UBERON:0001017!1.35e-08!82;UBERON:0005743!4.14e-08!86;UBERON:0000473!6.50e-08!8;UBERON:0001874!9.72e-08!1;UBERON:0002902!1.04e-07!1;UBERON:0009899!1.04e-07!1;UBERON:0002581!1.64e-07!1;UBERON:0001882!1.75e-07!1;UBERON:0005403!1.75e-07!1;UBERON:0000010!1.97e-07!8;UBERON:0000369!3.33e-07!4;UBERON:0002435!3.33e-07!4;UBERON:0000204!3.33e-07!4;UBERON:0010082!3.33e-07!4 | |ontology_enrichment_uberon=UBERON:0000013!5.00e-13!5;UBERON:0002410!5.00e-13!5;UBERON:0000073!6.70e-12!94;UBERON:0001016!6.70e-12!94;UBERON:0001017!1.35e-08!82;UBERON:0005743!4.14e-08!86;UBERON:0000473!6.50e-08!8;UBERON:0001874!9.72e-08!1;UBERON:0002902!1.04e-07!1;UBERON:0009899!1.04e-07!1;UBERON:0002581!1.64e-07!1;UBERON:0001882!1.75e-07!1;UBERON:0005403!1.75e-07!1;UBERON:0000010!1.97e-07!8;UBERON:0000369!3.33e-07!4;UBERON:0002435!3.33e-07!4;UBERON:0000204!3.33e-07!4;UBERON:0010082!3.33e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000013;7.76e-118;5!UBERON:0002410;7.76e-118;5!UBERON:0000010;3.75e-66;8 | |ontology_enrichment_uberon_v019=UBERON:0000013;7.76e-118;5!UBERON:0002410;7.76e-118;5!UBERON:0000010;3.75e-66;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,7.76e-118,5;UBERON:0002410,7.76e-118,5;UBERON:0000010,3.75e-66,8;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p10@MYCN | |short_description=p10@MYCN | ||
}} | }} |
Latest revision as of 19:19, 17 September 2015
Short description: | p10@MYCN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MYCN_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 464bp_to_M55330_5end |
EntrezGene: | MYCN |
HGNC: | 7559 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 7.46e-15 | 41 |
neurectodermal cell | 8.52e-11 | 59 |
ectodermal cell | 4.40e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 7.76e-118 | 5 |
autonomic nervous system | 7.76e-118 | 5 |
peripheral nervous system | 3.75e-66 | 8 |
nervous system | 1.68e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.83e-98 | 6 |
neuroectodermal tumor | 1.10e-59 | 10 |
germ cell and embryonal cancer | 7.08e-28 | 22 |
germ cell cancer | 7.08e-28 | 22 |